René's URL Explorer Experiment


Title: GitHub - SchmollerLab/micro-sam: Segment Anything for Microscopy - Modified to be compatible with Cell-ACDC · GitHub

Open Graph Title: GitHub - SchmollerLab/micro-sam: Segment Anything for Microscopy - Modified to be compatible with Cell-ACDC

X Title: GitHub - SchmollerLab/micro-sam: Segment Anything for Microscopy - Modified to be compatible with Cell-ACDC

Description: Segment Anything for Microscopy - Modified to be compatible with Cell-ACDC - SchmollerLab/micro-sam

Open Graph Description: Segment Anything for Microscopy - Modified to be compatible with Cell-ACDC - SchmollerLab/micro-sam

X Description: Segment Anything for Microscopy - Modified to be compatible with Cell-ACDC - SchmollerLab/micro-sam

Opengraph URL: https://github.com/SchmollerLab/micro-sam

X: @github

direct link

Domain: github.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:262e1ff0-0aa3-064e-b12e-5edfe6ff110d
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idA928:3ED5C4:29379B:3AC001:6A4C9B9C
html-safe-nonced71a673396e41b6f56a92bdf7dde1c0197580ebc4a269d2a6f1b08dd0f6d9728
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJBOTI4OjNFRDVDNDoyOTM3OUI6M0FDMDAxOjZBNEM5QjlDIiwidmlzaXRvcl9pZCI6IjMyMTAzNjU4ODUxOTg2NzA3NDgiLCJyZWdpb25fZWRnZSI6ImlhZCIsInJlZ2lvbl9yZW5kZXIiOiJpYWQifQ==
visitor-hmacfd5d145b7caa1509ff33b5dde24702336d1d948372c17795646c7bda40e01e39
hovercard-subject-tagrepository:1274294123
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/SchmollerLab/micro-sam
twitter:imagehttps://opengraph.githubassets.com/f4c41cb1435af825a4da7dcd658e50f2f64dfb36c48e01ca3ca74bb60ae5b1e2/SchmollerLab/micro-sam
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/f4c41cb1435af825a4da7dcd658e50f2f64dfb36c48e01ca3ca74bb60ae5b1e2/SchmollerLab/micro-sam
og:image:altSegment Anything for Microscopy - Modified to be compatible with Cell-ACDC - SchmollerLab/micro-sam
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None3d11bb817438277de2a940854450e83a7d32b6aeb5014e9e6b00a6423900251c
turbo-cache-controlno-cache
go-importgithub.com/SchmollerLab/micro-sam git https://github.com/SchmollerLab/micro-sam.git
octolytics-dimension-user_id79653821
octolytics-dimension-user_loginSchmollerLab
octolytics-dimension-repository_id1274294123
octolytics-dimension-repository_nwoSchmollerLab/micro-sam
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forktrue
octolytics-dimension-repository_parent_id1116049906
octolytics-dimension-repository_parent_nwokeejkrej/micro-sam
octolytics-dimension-repository_network_root_id635751761
octolytics-dimension-repository_network_root_nwocomputational-cell-analytics/micro-sam
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release7a2dede45637df6b92ddcfe2a557e67d4b5854ae
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://github.com/SchmollerLab/micro-sam#start-of-content
https://github.com/
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FSchmollerLab%2Fmicro-sam
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub Copilot appDirect agents from issue to mergehttps://github.com/features/ai/github-app
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
View all resourceshttps://github.com/resources
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
GitHub Starshttps://stars.github.com
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FSchmollerLab%2Fmicro-sam
Sign up https://github.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=SchmollerLab%2Fmicro-sam
Reloadhttps://github.com/SchmollerLab/micro-sam
Reloadhttps://github.com/SchmollerLab/micro-sam
Reloadhttps://github.com/SchmollerLab/micro-sam
Please reload this pagehttps://github.com/SchmollerLab/micro-sam
SchmollerLab https://github.com/SchmollerLab
micro-samhttps://github.com/SchmollerLab/micro-sam
keejkrej/micro-samhttps://github.com/keejkrej/micro-sam
Notifications https://github.com/login?return_to=%2FSchmollerLab%2Fmicro-sam
Fork 0 https://github.com/login?return_to=%2FSchmollerLab%2Fmicro-sam
Star 0 https://github.com/login?return_to=%2FSchmollerLab%2Fmicro-sam
Code https://github.com/SchmollerLab/micro-sam
Pull requests 1 https://github.com/SchmollerLab/micro-sam/pulls
Actions https://github.com/SchmollerLab/micro-sam/actions
Projects https://github.com/SchmollerLab/micro-sam/projects
Security and quality 0 https://github.com/SchmollerLab/micro-sam/security
Insights https://github.com/SchmollerLab/micro-sam/pulse
Code https://github.com/SchmollerLab/micro-sam
Pull requests https://github.com/SchmollerLab/micro-sam/pulls
Actions https://github.com/SchmollerLab/micro-sam/actions
Projects https://github.com/SchmollerLab/micro-sam/projects
Security and quality https://github.com/SchmollerLab/micro-sam/security
Insights https://github.com/SchmollerLab/micro-sam/pulse
https://github.com/SchmollerLab/micro-sam
Brancheshttps://github.com/SchmollerLab/micro-sam/branches
Tagshttps://github.com/SchmollerLab/micro-sam/tags
https://github.com/SchmollerLab/micro-sam/branches
https://github.com/SchmollerLab/micro-sam/tags
1,475 Commitshttps://github.com/SchmollerLab/micro-sam/commits/master/
https://github.com/SchmollerLab/micro-sam/commits/master/
.githubhttps://github.com/SchmollerLab/micro-sam/tree/master/.github
.githubhttps://github.com/SchmollerLab/micro-sam/tree/master/.github
deploymenthttps://github.com/SchmollerLab/micro-sam/tree/master/deployment
deploymenthttps://github.com/SchmollerLab/micro-sam/tree/master/deployment
developmenthttps://github.com/SchmollerLab/micro-sam/tree/master/development
developmenthttps://github.com/SchmollerLab/micro-sam/tree/master/development
dochttps://github.com/SchmollerLab/micro-sam/tree/master/doc
dochttps://github.com/SchmollerLab/micro-sam/tree/master/doc
exampleshttps://github.com/SchmollerLab/micro-sam/tree/master/examples
exampleshttps://github.com/SchmollerLab/micro-sam/tree/master/examples
finetuninghttps://github.com/SchmollerLab/micro-sam/tree/master/finetuning
finetuninghttps://github.com/SchmollerLab/micro-sam/tree/master/finetuning
micro_samhttps://github.com/SchmollerLab/micro-sam/tree/master/micro_sam
micro_samhttps://github.com/SchmollerLab/micro-sam/tree/master/micro_sam
notebookshttps://github.com/SchmollerLab/micro-sam/tree/master/notebooks
notebookshttps://github.com/SchmollerLab/micro-sam/tree/master/notebooks
scriptshttps://github.com/SchmollerLab/micro-sam/tree/master/scripts
scriptshttps://github.com/SchmollerLab/micro-sam/tree/master/scripts
testhttps://github.com/SchmollerLab/micro-sam/tree/master/test
testhttps://github.com/SchmollerLab/micro-sam/tree/master/test
workshopshttps://github.com/SchmollerLab/micro-sam/tree/master/workshops
workshopshttps://github.com/SchmollerLab/micro-sam/tree/master/workshops
.gitignorehttps://github.com/SchmollerLab/micro-sam/blob/master/.gitignore
.gitignorehttps://github.com/SchmollerLab/micro-sam/blob/master/.gitignore
LICENSEhttps://github.com/SchmollerLab/micro-sam/blob/master/LICENSE
LICENSEhttps://github.com/SchmollerLab/micro-sam/blob/master/LICENSE
MANIFEST.inhttps://github.com/SchmollerLab/micro-sam/blob/master/MANIFEST.in
MANIFEST.inhttps://github.com/SchmollerLab/micro-sam/blob/master/MANIFEST.in
README.mdhttps://github.com/SchmollerLab/micro-sam/blob/master/README.md
README.mdhttps://github.com/SchmollerLab/micro-sam/blob/master/README.md
RELEASE_OVERVIEW.mdhttps://github.com/SchmollerLab/micro-sam/blob/master/RELEASE_OVERVIEW.md
RELEASE_OVERVIEW.mdhttps://github.com/SchmollerLab/micro-sam/blob/master/RELEASE_OVERVIEW.md
build_doc.pyhttps://github.com/SchmollerLab/micro-sam/blob/master/build_doc.py
build_doc.pyhttps://github.com/SchmollerLab/micro-sam/blob/master/build_doc.py
environment.yamlhttps://github.com/SchmollerLab/micro-sam/blob/master/environment.yaml
environment.yamlhttps://github.com/SchmollerLab/micro-sam/blob/master/environment.yaml
pyproject.tomlhttps://github.com/SchmollerLab/micro-sam/blob/master/pyproject.toml
pyproject.tomlhttps://github.com/SchmollerLab/micro-sam/blob/master/pyproject.toml
requirements-dev.txthttps://github.com/SchmollerLab/micro-sam/blob/master/requirements-dev.txt
requirements-dev.txthttps://github.com/SchmollerLab/micro-sam/blob/master/requirements-dev.txt
setup.cfghttps://github.com/SchmollerLab/micro-sam/blob/master/setup.cfg
setup.cfghttps://github.com/SchmollerLab/micro-sam/blob/master/setup.cfg
READMEhttps://github.com/SchmollerLab/micro-sam
Licensehttps://github.com/SchmollerLab/micro-sam
https://computational-cell-analytics.github.io/micro-sam/
https://anaconda.org/conda-forge/micro_sam
https://codecov.io/gh/computational-cell-analytics/micro-sam
https://doi.org/10.5281/zenodo.7919746
https://github.com/SchmollerLab/micro-sam#segment-anything-for-microscopy
https://github.com/computational-cell-analytics/micro-sam
Segment Anythinghttps://segment-anything.com/
https://private-user-images.githubusercontent.com/4263537/240209267-d04cb158-9f5b-4460-98cd-023c4f19cccd.gif?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.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.MYt3eHW_ev8N-ezTSOM1GCssgMraP6QVd4rWgYrltwY
https://private-user-images.githubusercontent.com/4263537/237365805-dfca3d9b-dba5-440b-b0f9-72a0683ac410.gif?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.eyJpc3MiOiJnaXRodWIuY29tIiwiYXVkIjoicmF3LmdpdGh1YnVzZXJjb250ZW50LmNvbSIsImtleSI6ImtleTUiLCJleHAiOjE3ODM0MDU3NjksIm5iZiI6MTc4MzQwNTQ2OSwicGF0aCI6Ii80MjYzNTM3LzIzNzM2NTgwNS1kZmNhM2Q5Yi1kYmE1LTQ0MGItYjBmOS03MmEwNjgzYWM0MTAuZ2lmP1gtQW16LUFsZ29yaXRobT1BV1M0LUhNQUMtU0hBMjU2JlgtQW16LUNyZWRlbnRpYWw9QUtJQVZDT0RZTFNBNTNQUUs0WkElMkYyMDI2MDcwNyUyRnVzLWVhc3QtMSUyRnMzJTJGYXdzNF9yZXF1ZXN0JlgtQW16LURhdGU9MjAyNjA3MDdUMDYyNDI5WiZYLUFtei1FeHBpcmVzPTMwMCZYLUFtei1TaWduYXR1cmU9ODdlYjEwNzI0ZmQzMzIxNDdmNTY3YjQxMDFjMzMyYWJjMGFmOWQ0MTM3MTBkNGJiYzlkOGQxYjU5NDRkMWQ4ZiZYLUFtei1TaWduZWRIZWFkZXJzPWhvc3QmcmVzcG9uc2UtY29udGVudC10eXBlPWltYWdlJTJGZ2lmIn0.z5tZvJoQijMrJ5ZHlzLGPYys-NHbqZKJ6bxxzpLL5yI
https://private-user-images.githubusercontent.com/4263537/237365855-aefbf99f-e73a-4125-bb49-2e6592367a64.gif?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.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.odR66q-_WyWyyK0JzmvfQ3bGPxwWBEw4fzF9kU89m4s
issuehttps://github.com/computational-cell-analytics/micro-sam/issues/new/choose
image.schttps://forum.image.sc/
@constantinpapehttps://forum.image.sc/u/constantinpape/summary
@anwai98https://forum.image.sc/u/anwai98/summary
news feedhttps://forum.image.sc/t/microsam-news-feed
https://github.com/SchmollerLab/micro-sam#installation-and-usage
the documentationhttps://computational-cell-analytics.github.io/micro-sam/
the quickstart videohttps://youtu.be/gcv0fa84mCc
our virtual I2K workshop videohttps://www.youtube.com/watch?v=dxjU4W7bCis&list=PLdA9Vgd1gxTbvxmtk9CASftUOl_XItjDN&index=33
all video tutorialshttps://youtube.com/playlist?list=PLwYZXQJ3f36GQPpKCrSbHjGiH39X4XjSO&si=qNbB8IFXqAX33r_Z
https://github.com/SchmollerLab/micro-sam#contributing
contributing guidehttps://computational-cell-analytics.github.io/micro-sam/micro_sam.html#contribution-guide
discuss your idea in a new issuehttps://github.com/computational-cell-analytics/micro-sam/issues/new
https://github.com/SchmollerLab/micro-sam#citation
paperhttps://www.nature.com/articles/s41592-024-02580-4
Segment Anything publicationhttps://arxiv.org/abs/2304.02643
Mobile SAMhttps://arxiv.org/abs/2306.14289
Trackastrahttps://arxiv.org/abs/2405.15700
https://github.com/SchmollerLab/micro-sam#related-projects
https://github.com/MIC-DKFZ/napari-samhttps://github.com/MIC-DKFZ/napari-sam
https://github.com/royerlab/napari-segment-anythinghttps://github.com/royerlab/napari-segment-anything
https://github.com/hiroalchem/napari-SAM4IShttps://github.com/hiroalchem/napari-SAM4IS
WebKnossoshttps://webknossos.org/
QuPathhttps://qupath.github.io/
https://github.com/computational-cell-analytics/patho-samhttps://github.com/computational-cell-analytics/patho-sam
https://github.com/computational-cell-analytics/medico-samhttps://github.com/computational-cell-analytics/medico-sam
https://github.com/computational-cell-analytics/peft-samhttps://github.com/computational-cell-analytics/peft-sam
https://github.com/SchmollerLab/micro-sam#release-overview
herehttps://github.com/computational-cell-analytics/micro-sam/blob/master/RELEASE_OVERVIEW.md
computational-cell-analytics.github.io/micro-sam/https://computational-cell-analytics.github.io/micro-sam/
Readme https://github.com/SchmollerLab/micro-sam#readme-ov-file
MIT license https://github.com/SchmollerLab/micro-sam#MIT-1-ov-file
Please reload this pagehttps://github.com/SchmollerLab/micro-sam
Activityhttps://github.com/SchmollerLab/micro-sam/activity
Custom propertieshttps://github.com/SchmollerLab/micro-sam/custom-properties
0 forkshttps://github.com/SchmollerLab/micro-sam/forks
Report repository https://github.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FSchmollerLab%2Fmicro-sam&report=SchmollerLab+%28user%29
Releaseshttps://github.com/SchmollerLab/micro-sam/releases
Packages 0https://github.com/orgs/SchmollerLab/packages?repo_name=micro-sam
Please reload this pagehttps://github.com/SchmollerLab/micro-sam
Contributorshttps://github.com/SchmollerLab/micro-sam/graphs/contributors
Please reload this pagehttps://github.com/SchmollerLab/micro-sam
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.