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Title: Issues · RacimoLab/simGL · GitHub

Open Graph Title: Issues · RacimoLab/simGL

X Title: Issues · RacimoLab/simGL

Description: Simulate genotype likelihoods from tree sequence data - Issues · RacimoLab/simGL

Open Graph Description: Simulate genotype likelihoods from tree sequence data - Issues · RacimoLab/simGL

X Description: Simulate genotype likelihoods from tree sequence data - Issues · RacimoLab/simGL

Opengraph URL: https://github.com/RacimoLab/simGL

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Read depth at distinct sites is non-independenthttps://github.com/RacimoLab/simGL/issues/22
grahamgowerhttps://github.com/RacimoLab/simGL/issues?q=is%3Aissue%20state%3Aopen%20author%3Agrahamgower
Draw error rate from a distributionhttps://github.com/RacimoLab/simGL/issues/21
grahamgowerhttps://github.com/RacimoLab/simGL/issues?q=is%3Aissue%20state%3Aopen%20author%3Agrahamgower
Consider support for a reference bias when simulating read countshttps://github.com/RacimoLab/simGL/issues/20
grahamgowerhttps://github.com/RacimoLab/simGL/issues?q=is%3Aissue%20state%3Aopen%20author%3Agrahamgower
formalise the model for simulating read countshttps://github.com/RacimoLab/simGL/issues/17
grahamgowerhttps://github.com/RacimoLab/simGL/issues?q=is%3Aissue%20state%3Aopen%20author%3Agrahamgower
Integrate tests that compare genotype likelihoods with ANGSD/samtools/bcftools/gatk.https://github.com/RacimoLab/simGL/issues/13
grahamgowerhttps://github.com/RacimoLab/simGL/issues?q=is%3Aissue%20state%3Aopen%20author%3Agrahamgower
apply style and formatting checkshttps://github.com/RacimoLab/simGL/issues/6
grahamgowerhttps://github.com/RacimoLab/simGL/issues?q=is%3Aissue%20state%3Aopen%20author%3Agrahamgower
add setup.cfg, pyproject.toml, etchttps://github.com/RacimoLab/simGL/issues/3
grahamgowerhttps://github.com/RacimoLab/simGL/issues?q=is%3Aissue%20state%3Aopen%20author%3Agrahamgower
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