René's URL Explorer Experiment


Title: GitHub - OATML-Markslab/Tranception: Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval" · GitHub

Open Graph Title: GitHub - OATML-Markslab/Tranception: Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"

X Title: GitHub - OATML-Markslab/Tranception: Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"

Description: Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval" - OATML-Markslab/Tranception

Open Graph Description: Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval" - OATML-Markslab/Tranception

X Description: Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval" - OATML-Markslab/Tranception

Opengraph URL: https://github.com/OATML-Markslab/Tranception

X: @github

direct link

Domain: github.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:f676b477-4d74-bd2e-cbde-3882130bdf80
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idBFF6:3CD7FF:931A22:CD2676:6A4BD6AC
html-safe-nonce940ec845167e8098de614dc6086d85cc1bc5aeb9479051ac5e1f07672e5db5d4
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJCRkY2OjNDRDdGRjo5MzFBMjI6Q0QyNjc2OjZBNEJENkFDIiwidmlzaXRvcl9pZCI6IjY0OTg0Mzg3MTc4MTk4MzYwNzYiLCJyZWdpb25fZWRnZSI6ImlhZCIsInJlZ2lvbl9yZW5kZXIiOiJpYWQifQ==
visitor-hmac3e7778e99fc9902aadd6e7285827740ec38b6f20028d1faad34ab92525a8b069
hovercard-subject-tagrepository:495165462
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/OATML-Markslab/Tranception
twitter:imagehttps://opengraph.githubassets.com/4239024cdaddb36146a2dc7ded7b3216d47782ca29073a0675badb57daad5479/OATML-Markslab/Tranception
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/4239024cdaddb36146a2dc7ded7b3216d47782ca29073a0675badb57daad5479/OATML-Markslab/Tranception
og:image:altOfficial repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval" - OATML-Markslab/Tranception
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None9df996be9551ac02247d09a2f7f64ece66c35ca28885d346e98fdfda9cdaa37b
turbo-cache-controlno-cache
go-importgithub.com/OATML-Markslab/Tranception git https://github.com/OATML-Markslab/Tranception.git
octolytics-dimension-user_id120689084
octolytics-dimension-user_loginOATML-Markslab
octolytics-dimension-repository_id495165462
octolytics-dimension-repository_nwoOATML-Markslab/Tranception
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id495165462
octolytics-dimension-repository_network_root_nwoOATML-Markslab/Tranception
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release7242837c61fe4c8b774b83b9ee05b1881ba589f8
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://github.com/OATML-Markslab/Tranception#start-of-content
https://github.com/
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FOATML-Markslab%2FTranception
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub Copilot appDirect agents from issue to mergehttps://github.com/features/ai/github-app
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
View all resourceshttps://github.com/resources
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
GitHub Starshttps://stars.github.com
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FOATML-Markslab%2FTranception
Sign up https://github.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=OATML-Markslab%2FTranception
Reloadhttps://github.com/OATML-Markslab/Tranception
Reloadhttps://github.com/OATML-Markslab/Tranception
Reloadhttps://github.com/OATML-Markslab/Tranception
Please reload this pagehttps://github.com/OATML-Markslab/Tranception
OATML-Markslab https://github.com/OATML-Markslab
Tranceptionhttps://github.com/OATML-Markslab/Tranception
Notifications https://github.com/login?return_to=%2FOATML-Markslab%2FTranception
Fork 27 https://github.com/login?return_to=%2FOATML-Markslab%2FTranception
Star 169 https://github.com/login?return_to=%2FOATML-Markslab%2FTranception
Code https://github.com/OATML-Markslab/Tranception
Issues 5 https://github.com/OATML-Markslab/Tranception/issues
Pull requests 1 https://github.com/OATML-Markslab/Tranception/pulls
Actions https://github.com/OATML-Markslab/Tranception/actions
Projects https://github.com/OATML-Markslab/Tranception/projects
Security and quality 0 https://github.com/OATML-Markslab/Tranception/security
Insights https://github.com/OATML-Markslab/Tranception/pulse
Code https://github.com/OATML-Markslab/Tranception
Issues https://github.com/OATML-Markslab/Tranception/issues
Pull requests https://github.com/OATML-Markslab/Tranception/pulls
Actions https://github.com/OATML-Markslab/Tranception/actions
Projects https://github.com/OATML-Markslab/Tranception/projects
Security and quality https://github.com/OATML-Markslab/Tranception/security
Insights https://github.com/OATML-Markslab/Tranception/pulse
https://github.com/OATML-Markslab/Tranception
Brancheshttps://github.com/OATML-Markslab/Tranception/branches
Tagshttps://github.com/OATML-Markslab/Tranception/tags
https://github.com/OATML-Markslab/Tranception/branches
https://github.com/OATML-Markslab/Tranception/tags
37 Commitshttps://github.com/OATML-Markslab/Tranception/commits/main/
https://github.com/OATML-Markslab/Tranception/commits/main/
design_apphttps://github.com/OATML-Markslab/Tranception/tree/main/design_app
design_apphttps://github.com/OATML-Markslab/Tranception/tree/main/design_app
exampleshttps://github.com/OATML-Markslab/Tranception/tree/main/examples
exampleshttps://github.com/OATML-Markslab/Tranception/tree/main/examples
proteingymhttps://github.com/OATML-Markslab/Tranception/tree/main/proteingym
proteingymhttps://github.com/OATML-Markslab/Tranception/tree/main/proteingym
tranceptionhttps://github.com/OATML-Markslab/Tranception/tree/main/tranception
tranceptionhttps://github.com/OATML-Markslab/Tranception/tree/main/tranception
.gitignorehttps://github.com/OATML-Markslab/Tranception/blob/main/.gitignore
.gitignorehttps://github.com/OATML-Markslab/Tranception/blob/main/.gitignore
LICENSEhttps://github.com/OATML-Markslab/Tranception/blob/main/LICENSE
LICENSEhttps://github.com/OATML-Markslab/Tranception/blob/main/LICENSE
README.mdhttps://github.com/OATML-Markslab/Tranception/blob/main/README.md
README.mdhttps://github.com/OATML-Markslab/Tranception/blob/main/README.md
performance_analysis_proteingym.pyhttps://github.com/OATML-Markslab/Tranception/blob/main/performance_analysis_proteingym.py
performance_analysis_proteingym.pyhttps://github.com/OATML-Markslab/Tranception/blob/main/performance_analysis_proteingym.py
score_tranception_proteingym.pyhttps://github.com/OATML-Markslab/Tranception/blob/main/score_tranception_proteingym.py
score_tranception_proteingym.pyhttps://github.com/OATML-Markslab/Tranception/blob/main/score_tranception_proteingym.py
tranception_env.ymlhttps://github.com/OATML-Markslab/Tranception/blob/main/tranception_env.yml
tranception_env.ymlhttps://github.com/OATML-Markslab/Tranception/blob/main/tranception_env.yml
READMEhttps://github.com/OATML-Markslab/Tranception
MIT licensehttps://github.com/OATML-Markslab/Tranception
https://github.com/OATML-Markslab/Tranception#tranception
Marks labhttps://www.deboramarkslab.com/
OATML grouphttps://oatml.cs.ox.ac.uk/
https://github.com/OATML-Markslab/Tranception#abstract
https://github.com/OATML-Markslab/Tranception#setup
Clustal Omegahttp://www.clustal.org/omega/#Download
https://github.com/OATML-Markslab/Tranception#tranception-1
Huggging Face hubhttps://huggingface.co/OATML-Markslab/Tranception_Large
Hopf et al.https://www.nature.com/articles/nbt.3769
Hopf et al.https://www.nature.com/articles/nbt.3769
EVE modelshttps://www.nature.com/articles/s41586-021-04043-8
issuehttps://github.com/OATML-Markslab/Tranception/issues/9
https://github.com/OATML-Markslab/Tranception#fitness-prediction-with-tranception--performance-evaluation-on-proteingym
main scoring scripthttps://github.com/OATML-Markslab/Tranception/blob/main/score_tranception_proteingym.py
performance analysis scripthttps://github.com/OATML-Markslab/Tranception/blob/main/performance_analysis_proteingym.py
exampleshttps://github.com/OATML-Markslab/Tranception/tree/main/examples
https://github.com/OATML-Markslab/Tranception#proteingym-benchmarks
repohttps://github.com/OATML-Markslab/ProteinGym
websitehttps://www.proteingym.org/
repohttps://github.com/OATML-Markslab/ProteinGym
https://github.com/OATML-Markslab/Tranception#multiple-sequence-alignments-msas
https://github.com/OATML-Markslab/Tranception#protein-design
Hugging Face spaceshttps://huggingface.co/spaces/PascalNotin/Tranception_design
Colab notebookhttps://colab.research.google.com/drive/12ni4U1Na9VWwnwdpGzYHCkNC7sud9SLy?usp=sharing
https://github.com/OATML-Markslab/Tranception#license
https://github.com/OATML-Markslab/Tranception#reference
https://github.com/OATML-Markslab/Tranception#links
https://proceedings.mlr.press/v162/notin22a.htmlhttps://proceedings.mlr.press/v162/notin22a.html
https://arxiv.org/abs/2205.13760https://arxiv.org/abs/2205.13760
https://huggingface.co/OATML-Markslab/Tranceptionhttps://huggingface.co/OATML-Markslab/Tranception
https://www.proteingym.org/https://www.proteingym.org/
https://github.com/OATML-Markslab/ProteinGymhttps://github.com/OATML-Markslab/ProteinGym
Hugging Face spaceshttps://huggingface.co/spaces/PascalNotin/Tranception_design
Colabhttps://colab.research.google.com/drive/12ni4U1Na9VWwnwdpGzYHCkNC7sud9SLy?usp=sharing
Readme https://github.com/OATML-Markslab/Tranception#readme-ov-file
MIT license https://github.com/OATML-Markslab/Tranception#MIT-1-ov-file
Please reload this pagehttps://github.com/OATML-Markslab/Tranception
Activityhttps://github.com/OATML-Markslab/Tranception/activity
Custom propertieshttps://github.com/OATML-Markslab/Tranception/custom-properties
27 forkshttps://github.com/OATML-Markslab/Tranception/forks
Report repository https://github.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FOATML-Markslab%2FTranception&report=OATML-Markslab+%28user%29
Releaseshttps://github.com/OATML-Markslab/Tranception/releases
Packages 0https://github.com/orgs/OATML-Markslab/packages?repo_name=Tranception
Please reload this pagehttps://github.com/OATML-Markslab/Tranception
Please reload this pagehttps://github.com/OATML-Markslab/Tranception
Contributorshttps://github.com/OATML-Markslab/Tranception/graphs/contributors
Please reload this pagehttps://github.com/OATML-Markslab/Tranception
Python 80.5% https://github.com/OATML-Markslab/Tranception/search?l=python
Jupyter Notebook 19.5% https://github.com/OATML-Markslab/Tranception/search?l=jupyter-notebook
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.