René's URL Explorer Experiment


Title: GitHub - LiuLabUB/HMMRATAC: HMMRATAC peak caller for ATAC-seq data · GitHub

Open Graph Title: GitHub - LiuLabUB/HMMRATAC: HMMRATAC peak caller for ATAC-seq data

X Title: GitHub - LiuLabUB/HMMRATAC: HMMRATAC peak caller for ATAC-seq data

Description: HMMRATAC peak caller for ATAC-seq data. Contribute to LiuLabUB/HMMRATAC development by creating an account on GitHub.

Open Graph Description: HMMRATAC peak caller for ATAC-seq data. Contribute to LiuLabUB/HMMRATAC development by creating an account on GitHub.

X Description: HMMRATAC peak caller for ATAC-seq data. Contribute to LiuLabUB/HMMRATAC development by creating an account on GitHub.

Opengraph URL: https://github.com/LiuLabUB/HMMRATAC

X: @github

direct link

Domain: github.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:8c50eeec-39a0-ae4e-9b8b-142e1ace1f00
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-id9DCC:314561:5C1ADBB:7EF43CD:6A4BB082
html-safe-nonce0fd7441d1f522286d3a50c29b93f2bd057b8a8332d423e0d8fa88694eb308ef7
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiI5RENDOjMxNDU2MTo1QzFBREJCOjdFRjQzQ0Q6NkE0QkIwODIiLCJ2aXNpdG9yX2lkIjoiMzU0OTUzMjY2MTA5MDY3Mzk1IiwicmVnaW9uX2VkZ2UiOiJpYWQiLCJyZWdpb25fcmVuZGVyIjoiaWFkIn0=
visitor-hmac8ac1254435311f7e8dc31d5c1d94cd6467a61e0259199603b67b67cd7e2d59ed
hovercard-subject-tagrepository:61397594
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/LiuLabUB/HMMRATAC
twitter:imagehttps://opengraph.githubassets.com/402b4bf9fc29ea378e583c3eb7ffa7d02e4317cae208d49ef17b8f89716a7651/LiuLabUB/HMMRATAC
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/402b4bf9fc29ea378e583c3eb7ffa7d02e4317cae208d49ef17b8f89716a7651/LiuLabUB/HMMRATAC
og:image:altHMMRATAC peak caller for ATAC-seq data. Contribute to LiuLabUB/HMMRATAC development by creating an account on GitHub.
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None3ede370c1d797b0693475db9bb4298020548dcae9c98a2f071d54aaf1b4e9faa
turbo-cache-controlno-cache
go-importgithub.com/LiuLabUB/HMMRATAC git https://github.com/LiuLabUB/HMMRATAC.git
octolytics-dimension-user_id7632588
octolytics-dimension-user_loginLiuLabUB
octolytics-dimension-repository_id61397594
octolytics-dimension-repository_nwoLiuLabUB/HMMRATAC
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id61397594
octolytics-dimension-repository_network_root_nwoLiuLabUB/HMMRATAC
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
releaseaf627ba2b0ed5351c6d1b8e04fdbe893325c237f
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://github.com/LiuLabUB/HMMRATAC#start-of-content
https://github.com/
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FLiuLabUB%2FHMMRATAC
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub Copilot appDirect agents from issue to mergehttps://github.com/features/ai/github-app
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
View all resourceshttps://github.com/resources
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
GitHub Starshttps://stars.github.com
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FLiuLabUB%2FHMMRATAC
Sign up https://github.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=LiuLabUB%2FHMMRATAC
Reloadhttps://github.com/LiuLabUB/HMMRATAC
Reloadhttps://github.com/LiuLabUB/HMMRATAC
Reloadhttps://github.com/LiuLabUB/HMMRATAC
Please reload this pagehttps://github.com/LiuLabUB/HMMRATAC
LiuLabUB https://github.com/LiuLabUB
HMMRATAChttps://github.com/LiuLabUB/HMMRATAC
Notifications https://github.com/login?return_to=%2FLiuLabUB%2FHMMRATAC
Fork 21 https://github.com/login?return_to=%2FLiuLabUB%2FHMMRATAC
Star 100 https://github.com/login?return_to=%2FLiuLabUB%2FHMMRATAC
Code https://github.com/LiuLabUB/HMMRATAC
Issues 40 https://github.com/LiuLabUB/HMMRATAC/issues
Pull requests 0 https://github.com/LiuLabUB/HMMRATAC/pulls
Actions https://github.com/LiuLabUB/HMMRATAC/actions
Projects https://github.com/LiuLabUB/HMMRATAC/projects
Security and quality 0 https://github.com/LiuLabUB/HMMRATAC/security
Insights https://github.com/LiuLabUB/HMMRATAC/pulse
Code https://github.com/LiuLabUB/HMMRATAC
Issues https://github.com/LiuLabUB/HMMRATAC/issues
Pull requests https://github.com/LiuLabUB/HMMRATAC/pulls
Actions https://github.com/LiuLabUB/HMMRATAC/actions
Projects https://github.com/LiuLabUB/HMMRATAC/projects
Security and quality https://github.com/LiuLabUB/HMMRATAC/security
Insights https://github.com/LiuLabUB/HMMRATAC/pulse
https://github.com/LiuLabUB/HMMRATAC
Brancheshttps://github.com/LiuLabUB/HMMRATAC/branches
Tagshttps://github.com/LiuLabUB/HMMRATAC/tags
https://github.com/LiuLabUB/HMMRATAC/branches
https://github.com/LiuLabUB/HMMRATAC/tags
120 Commitshttps://github.com/LiuLabUB/HMMRATAC/commits/master/
https://github.com/LiuLabUB/HMMRATAC/commits/master/
.githubhttps://github.com/LiuLabUB/HMMRATAC/tree/master/.github
.githubhttps://github.com/LiuLabUB/HMMRATAC/tree/master/.github
TestDatahttps://github.com/LiuLabUB/HMMRATAC/tree/master/TestData
TestDatahttps://github.com/LiuLabUB/HMMRATAC/tree/master/TestData
ThirdPartyJARShttps://github.com/LiuLabUB/HMMRATAC/tree/master/ThirdPartyJARS
ThirdPartyJARShttps://github.com/LiuLabUB/HMMRATAC/tree/master/ThirdPartyJARS
gradle/wrapperhttps://github.com/LiuLabUB/HMMRATAC/tree/master/gradle/wrapper
gradle/wrapperhttps://github.com/LiuLabUB/HMMRATAC/tree/master/gradle/wrapper
src/main/javahttps://github.com/LiuLabUB/HMMRATAC/tree/master/src/main/java
src/main/javahttps://github.com/LiuLabUB/HMMRATAC/tree/master/src/main/java
HMMRATAC_Guide.mdhttps://github.com/LiuLabUB/HMMRATAC/blob/master/HMMRATAC_Guide.md
HMMRATAC_Guide.mdhttps://github.com/LiuLabUB/HMMRATAC/blob/master/HMMRATAC_Guide.md
LICENSEhttps://github.com/LiuLabUB/HMMRATAC/blob/master/LICENSE
LICENSEhttps://github.com/LiuLabUB/HMMRATAC/blob/master/LICENSE
Make_HMMRATAC_Files.shhttps://github.com/LiuLabUB/HMMRATAC/blob/master/Make_HMMRATAC_Files.sh
Make_HMMRATAC_Files.shhttps://github.com/LiuLabUB/HMMRATAC/blob/master/Make_HMMRATAC_Files.sh
README.mdhttps://github.com/LiuLabUB/HMMRATAC/blob/master/README.md
README.mdhttps://github.com/LiuLabUB/HMMRATAC/blob/master/README.md
_config.ymlhttps://github.com/LiuLabUB/HMMRATAC/blob/master/_config.yml
_config.ymlhttps://github.com/LiuLabUB/HMMRATAC/blob/master/_config.yml
build.gradlehttps://github.com/LiuLabUB/HMMRATAC/blob/master/build.gradle
build.gradlehttps://github.com/LiuLabUB/HMMRATAC/blob/master/build.gradle
gradlewhttps://github.com/LiuLabUB/HMMRATAC/blob/master/gradlew
gradlewhttps://github.com/LiuLabUB/HMMRATAC/blob/master/gradlew
gradlew.bathttps://github.com/LiuLabUB/HMMRATAC/blob/master/gradlew.bat
gradlew.bathttps://github.com/LiuLabUB/HMMRATAC/blob/master/gradlew.bat
settings.gradlehttps://github.com/LiuLabUB/HMMRATAC/blob/master/settings.gradle
settings.gradlehttps://github.com/LiuLabUB/HMMRATAC/blob/master/settings.gradle
READMEhttps://github.com/LiuLabUB/HMMRATAC
GPL-3.0 licensehttps://github.com/LiuLabUB/HMMRATAC
https://github.com/LiuLabUB/HMMRATAC#hmmratac
https://github.com/macs3-project/MACShttps://github.com/macs3-project/MACS
http://www.htslib.org/download/http://www.htslib.org/download/
https://github.com/LiuLabUB/HMMRATAC/releaseshttps://github.com/LiuLabUB/HMMRATAC/releases
HMMRATAC_Guide.mdhttps://github.com/LiuLabUB/HMMRATAC/blob/master/HMMRATAC_Guide.md#commandline-options
HMMRATAC: a Hidden Markov ModeleR for ATAC-seqhttps://academic.oup.com/nar/advance-article/doi/10.1093/nar/gkz533/5519166
machine-learning https://github.com/topics/machine-learning
sequencing https://github.com/topics/sequencing
peak-caller https://github.com/topics/peak-caller
atac-seq https://github.com/topics/atac-seq
peak-detection https://github.com/topics/peak-detection
Readme https://github.com/LiuLabUB/HMMRATAC#readme-ov-file
GPL-3.0 license https://github.com/LiuLabUB/HMMRATAC#GPL-3.0-1-ov-file
Please reload this pagehttps://github.com/LiuLabUB/HMMRATAC
Activityhttps://github.com/LiuLabUB/HMMRATAC/activity
Custom propertieshttps://github.com/LiuLabUB/HMMRATAC/custom-properties
21 forkshttps://github.com/LiuLabUB/HMMRATAC/forks
Report repository https://github.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FLiuLabUB%2FHMMRATAC&report=LiuLabUB+%28user%29
Releases 13https://github.com/LiuLabUB/HMMRATAC/releases
1.2.10 Latest Mar 3, 2020 https://github.com/LiuLabUB/HMMRATAC/releases/tag/1.2.10
+ 12 releaseshttps://github.com/LiuLabUB/HMMRATAC/releases
Packages 0https://github.com/orgs/LiuLabUB/packages?repo_name=HMMRATAC
Please reload this pagehttps://github.com/LiuLabUB/HMMRATAC
Please reload this pagehttps://github.com/LiuLabUB/HMMRATAC
Contributorshttps://github.com/LiuLabUB/HMMRATAC/graphs/contributors
Please reload this pagehttps://github.com/LiuLabUB/HMMRATAC
Java 99.4% https://github.com/LiuLabUB/HMMRATAC/search?l=java
Shell 0.6% https://github.com/LiuLabUB/HMMRATAC/search?l=shell
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.