René's URL Explorer Experiment


Title: GitHub - LangeLab/HarmonizePy: Pure-Python batch-effect harmonization toolkit validated, ported from HarmonizR · GitHub

Open Graph Title: GitHub - LangeLab/HarmonizePy: Pure-Python batch-effect harmonization toolkit validated, ported from HarmonizR

X Title: GitHub - LangeLab/HarmonizePy: Pure-Python batch-effect harmonization toolkit validated, ported from HarmonizR

Description: Pure-Python batch-effect harmonization toolkit validated, ported from HarmonizR - LangeLab/HarmonizePy

Open Graph Description: Pure-Python batch-effect harmonization toolkit validated, ported from HarmonizR - LangeLab/HarmonizePy

X Description: Pure-Python batch-effect harmonization toolkit validated, ported from HarmonizR - LangeLab/HarmonizePy

Opengraph URL: https://github.com/LangeLab/HarmonizePy

X: @github

direct link

Domain: github.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:e90ddff1-4e8f-565d-7bc8-c772bd6bbb78
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idE914:13B1D:1B35D02:265A44C:6A4CC4E7
html-safe-nonce49076527e02caf69da57c029d79094a7c497c23d3a2ac5c20d602d03c161fd2c
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJFOTE0OjEzQjFEOjFCMzVEMDI6MjY1QTQ0Qzo2QTRDQzRFNyIsInZpc2l0b3JfaWQiOiI3NTQ4MjgwNTQ3NzYxMjQzMzY3IiwicmVnaW9uX2VkZ2UiOiJpYWQiLCJyZWdpb25fcmVuZGVyIjoiaWFkIn0=
visitor-hmacade947ebedf117a80116c1dda509cfbafc9ebaab3fd84bbafe4d25452c1ca9e9
hovercard-subject-tagrepository:1185593251
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/LangeLab/HarmonizePy
twitter:imagehttps://opengraph.githubassets.com/2bf29ab81c1767cc768033f120cb239fc70c1e381a61eccff04d013a1e5439be/LangeLab/HarmonizePy
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/2bf29ab81c1767cc768033f120cb239fc70c1e381a61eccff04d013a1e5439be/LangeLab/HarmonizePy
og:image:altPure-Python batch-effect harmonization toolkit validated, ported from HarmonizR - LangeLab/HarmonizePy
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None3d11bb817438277de2a940854450e83a7d32b6aeb5014e9e6b00a6423900251c
turbo-cache-controlno-cache
go-importgithub.com/LangeLab/HarmonizePy git https://github.com/LangeLab/HarmonizePy.git
octolytics-dimension-user_id22403445
octolytics-dimension-user_loginLangeLab
octolytics-dimension-repository_id1185593251
octolytics-dimension-repository_nwoLangeLab/HarmonizePy
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id1185593251
octolytics-dimension-repository_network_root_nwoLangeLab/HarmonizePy
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
released0da0eb92994395299ed4450bf67b0373005be36
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://github.com/LangeLab/HarmonizePy#start-of-content
https://github.com/
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FLangeLab%2FHarmonizePy
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub Copilot appDirect agents from issue to mergehttps://github.com/features/ai/github-app
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
View all resourceshttps://github.com/resources
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
GitHub Starshttps://stars.github.com
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FLangeLab%2FHarmonizePy
Sign up https://github.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=LangeLab%2FHarmonizePy
Reloadhttps://github.com/LangeLab/HarmonizePy
Reloadhttps://github.com/LangeLab/HarmonizePy
Reloadhttps://github.com/LangeLab/HarmonizePy
Please reload this pagehttps://github.com/LangeLab/HarmonizePy
LangeLab https://github.com/LangeLab
HarmonizePyhttps://github.com/LangeLab/HarmonizePy
Notifications https://github.com/login?return_to=%2FLangeLab%2FHarmonizePy
Fork 0 https://github.com/login?return_to=%2FLangeLab%2FHarmonizePy
Star 1 https://github.com/login?return_to=%2FLangeLab%2FHarmonizePy
Code https://github.com/LangeLab/HarmonizePy
Issues 0 https://github.com/LangeLab/HarmonizePy/issues
Pull requests 0 https://github.com/LangeLab/HarmonizePy/pulls
Actions https://github.com/LangeLab/HarmonizePy/actions
Projects https://github.com/LangeLab/HarmonizePy/projects
Wiki https://github.com/LangeLab/HarmonizePy/wiki
Security and quality 0 https://github.com/LangeLab/HarmonizePy/security
Insights https://github.com/LangeLab/HarmonizePy/pulse
Code https://github.com/LangeLab/HarmonizePy
Issues https://github.com/LangeLab/HarmonizePy/issues
Pull requests https://github.com/LangeLab/HarmonizePy/pulls
Actions https://github.com/LangeLab/HarmonizePy/actions
Projects https://github.com/LangeLab/HarmonizePy/projects
Wiki https://github.com/LangeLab/HarmonizePy/wiki
Security and quality https://github.com/LangeLab/HarmonizePy/security
Insights https://github.com/LangeLab/HarmonizePy/pulse
https://github.com/LangeLab/HarmonizePy
Brancheshttps://github.com/LangeLab/HarmonizePy/branches
Tagshttps://github.com/LangeLab/HarmonizePy/tags
https://github.com/LangeLab/HarmonizePy/branches
https://github.com/LangeLab/HarmonizePy/tags
32 Commitshttps://github.com/LangeLab/HarmonizePy/commits/main/
https://github.com/LangeLab/HarmonizePy/commits/main/
.github/workflowshttps://github.com/LangeLab/HarmonizePy/tree/main/.github/workflows
.github/workflowshttps://github.com/LangeLab/HarmonizePy/tree/main/.github/workflows
assetshttps://github.com/LangeLab/HarmonizePy/tree/main/assets
assetshttps://github.com/LangeLab/HarmonizePy/tree/main/assets
benchmarkshttps://github.com/LangeLab/HarmonizePy/tree/main/benchmarks
benchmarkshttps://github.com/LangeLab/HarmonizePy/tree/main/benchmarks
datahttps://github.com/LangeLab/HarmonizePy/tree/main/data
datahttps://github.com/LangeLab/HarmonizePy/tree/main/data
docshttps://github.com/LangeLab/HarmonizePy/tree/main/docs
docshttps://github.com/LangeLab/HarmonizePy/tree/main/docs
renvhttps://github.com/LangeLab/HarmonizePy/tree/main/renv
renvhttps://github.com/LangeLab/HarmonizePy/tree/main/renv
src/harmonizepyhttps://github.com/LangeLab/HarmonizePy/tree/main/src/harmonizepy
src/harmonizepyhttps://github.com/LangeLab/HarmonizePy/tree/main/src/harmonizepy
testshttps://github.com/LangeLab/HarmonizePy/tree/main/tests
testshttps://github.com/LangeLab/HarmonizePy/tree/main/tests
.Rprofilehttps://github.com/LangeLab/HarmonizePy/blob/main/.Rprofile
.Rprofilehttps://github.com/LangeLab/HarmonizePy/blob/main/.Rprofile
.gitignorehttps://github.com/LangeLab/HarmonizePy/blob/main/.gitignore
.gitignorehttps://github.com/LangeLab/HarmonizePy/blob/main/.gitignore
.python-versionhttps://github.com/LangeLab/HarmonizePy/blob/main/.python-version
.python-versionhttps://github.com/LangeLab/HarmonizePy/blob/main/.python-version
CHANGELOG.mdhttps://github.com/LangeLab/HarmonizePy/blob/main/CHANGELOG.md
CHANGELOG.mdhttps://github.com/LangeLab/HarmonizePy/blob/main/CHANGELOG.md
CITATION.cffhttps://github.com/LangeLab/HarmonizePy/blob/main/CITATION.cff
CITATION.cffhttps://github.com/LangeLab/HarmonizePy/blob/main/CITATION.cff
LICENSEhttps://github.com/LangeLab/HarmonizePy/blob/main/LICENSE
LICENSEhttps://github.com/LangeLab/HarmonizePy/blob/main/LICENSE
README.mdhttps://github.com/LangeLab/HarmonizePy/blob/main/README.md
README.mdhttps://github.com/LangeLab/HarmonizePy/blob/main/README.md
pyproject.tomlhttps://github.com/LangeLab/HarmonizePy/blob/main/pyproject.toml
pyproject.tomlhttps://github.com/LangeLab/HarmonizePy/blob/main/pyproject.toml
renv.lockhttps://github.com/LangeLab/HarmonizePy/blob/main/renv.lock
renv.lockhttps://github.com/LangeLab/HarmonizePy/blob/main/renv.lock
uv.lockhttps://github.com/LangeLab/HarmonizePy/blob/main/uv.lock
uv.lockhttps://github.com/LangeLab/HarmonizePy/blob/main/uv.lock
READMEhttps://github.com/LangeLab/HarmonizePy
Licensehttps://github.com/LangeLab/HarmonizePy
https://raw.githubusercontent.com/LangeLab/HarmonizePy/main/assets/logo_readme.svg
https://camo.githubusercontent.com/68541cecd9fe56f854d5508500ead1590c61752f95d1e98605289b490c0bb395/68747470733a2f2f696d672e736869656c64732e696f2f62616467652f707974686f6e2d332e31322d2d332e31342d3244374434363f7374796c653d666c61742d737175617265266c6f676f3d707974686f6e266c6f676f436f6c6f723d7768697465
https://camo.githubusercontent.com/4082fa1ae5aa46bdf65b4643ea4d76dda827aa8933b5d27447f2aef221da9243/68747470733a2f2f696d672e736869656c64732e696f2f62616467652f76657273696f6e2d302e332e322d3842354346363f7374796c653d666c61742d737175617265
https://camo.githubusercontent.com/63b3a30ff8550cda01db8104aeac932c4047e98a3d85eafae48cde511d9b2fce/68747470733a2f2f696d672e736869656c64732e696f2f62616467652f7374617475732d616c7068612d4331374431303f7374796c653d666c61742d737175617265
https://github.com/LangeLab/HarmonizePy/actions/workflows/ci.yml/badge.svg
https://camo.githubusercontent.com/f55670b22d06a45a29282fb8678408c2f98765d5a5971e1de72fa554af67280b/68747470733a2f2f696d672e736869656c64732e696f2f62616467652f36323825323074657374732d636f6c6c65637465642d3232433535453f7374796c653d666c61742d737175617265
https://camo.githubusercontent.com/8d6e45f44dcfd01cb5eef94e5b6df015251b5765c13ad6b1c5fd294775b4b8f1/68747470733a2f2f636f6465636f762e696f2f67682f4c616e67654c61622f4861726d6f6e697a6550792f6272616e63682f6d61696e2f67726170682f62616467652e737667
https://camo.githubusercontent.com/929329dd05283a8196389c32a48d2762f604458f05ff66c1817125a33cf576b5/68747470733a2f2f696d672e736869656c64732e696f2f62616467652f6c6963656e73652d47504c2d2d332e302d3442394436453f7374796c653d666c61742d737175617265
https://github.com/LangeLab/HarmonizePy/blob/main/CHANGELOG.md
https://github.com/LangeLab/HarmonizePy/blob/main/CITATION.cff
https://github.com/LangeLab/HarmonizePy/issues
https://github.com/LangeLab/HarmonizePy/wiki
https://github.com/LangeLab/HarmonizePy#documentation
Installationhttps://github.com/LangeLab/HarmonizePy/wiki/Installation
Quick Starthttps://github.com/LangeLab/HarmonizePy/wiki/Quick-Start
Input Formathttps://github.com/LangeLab/HarmonizePy/wiki/Input-Format
Algorithmshttps://github.com/LangeLab/HarmonizePy/wiki/Algorithms
Pipelinehttps://github.com/LangeLab/HarmonizePy/wiki/Pipeline
API Referencehttps://github.com/LangeLab/HarmonizePy/wiki/API-Reference
CLI Referencehttps://github.com/LangeLab/HarmonizePy/wiki/CLI-Reference
R Compatibilityhttps://github.com/LangeLab/HarmonizePy/wiki/R-Compatibility
Benchmarkshttps://github.com/LangeLab/HarmonizePy/wiki/Benchmarks
https://github.com/LangeLab/HarmonizePy#capabilities
R Compatibilityhttps://github.com/LangeLab/HarmonizePy/wiki/R-Compatibility
Benchmarkshttps://github.com/LangeLab/HarmonizePy/wiki/Benchmarks
https://github.com/LangeLab/HarmonizePy#installation
Installationhttps://github.com/LangeLab/HarmonizePy/wiki/Installation
https://github.com/LangeLab/HarmonizePy#quick-start
https://github.com/LangeLab/HarmonizePy#input-format
https://github.com/LangeLab/HarmonizePy#parameter-reference
API Referencehttps://github.com/LangeLab/HarmonizePy/wiki/API-Reference
https://github.com/LangeLab/HarmonizePy#choosing-algorithm-and-strategy
Algorithmshttps://github.com/LangeLab/HarmonizePy/wiki/Algorithms
Pipelinehttps://github.com/LangeLab/HarmonizePy/wiki/Pipeline
https://github.com/LangeLab/HarmonizePy#cli-usage
CLI Referencehttps://github.com/LangeLab/HarmonizePy/wiki/CLI-Reference
https://github.com/LangeLab/HarmonizePy#running-tests
https://github.com/LangeLab/HarmonizePy#project-layout
https://github.com/LangeLab/HarmonizePy#license
GPL-3.0https://github.com/LangeLab/HarmonizePy/blob/main/LICENSE
https://github.com/LangeLab/HarmonizePy#references
https://github.com/LangeLab/HarmonizePy#manuscripts
https://doi.org/10.1038/s41467-022-31007-xhttps://doi.org/10.1038/s41467-022-31007-x
https://doi.org/10.1186/s12859-025-06073-9https://doi.org/10.1186/s12859-025-06073-9
https://github.com/LangeLab/HarmonizePy#code-and-packages
https://www.bioconductor.org/packages/release/bioc/html/HarmonizR.htmlhttps://www.bioconductor.org/packages/release/bioc/html/HarmonizR.html
https://github.com/HSU-HPC/HarmonizRhttps://github.com/HSU-HPC/HarmonizR
batch-effect https://github.com/topics/batch-effect
Readme https://github.com/LangeLab/HarmonizePy#readme-ov-file
View license https://github.com/LangeLab/HarmonizePy#License-1-ov-file
Please reload this pagehttps://github.com/LangeLab/HarmonizePy
Activityhttps://github.com/LangeLab/HarmonizePy/activity
Custom propertieshttps://github.com/LangeLab/HarmonizePy/custom-properties
0 forkshttps://github.com/LangeLab/HarmonizePy/forks
Report repository https://github.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FLangeLab%2FHarmonizePy&report=LangeLab+%28user%29
Releaseshttps://github.com/LangeLab/HarmonizePy/releases
1 tags https://github.com/LangeLab/HarmonizePy/tags
Packages 0https://github.com/orgs/LangeLab/packages?repo_name=HarmonizePy
Please reload this pagehttps://github.com/LangeLab/HarmonizePy
Contributorshttps://github.com/LangeLab/HarmonizePy/graphs/contributors
Please reload this pagehttps://github.com/LangeLab/HarmonizePy
Python 91.8% https://github.com/LangeLab/HarmonizePy/search?l=python
R 8.2% https://github.com/LangeLab/HarmonizePy/search?l=r
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.