René's URL Explorer Experiment


Title: Image Analysis - Institut Pasteur · GitHub

Open Graph Title: Image Analysis - Institut Pasteur

X Title: Image Analysis - Institut Pasteur

Description: Tools developed and maintained by the image analysis engineers of the Image Analysis Hub and the Developmental and Stem Cell Biology Department / CNRS UMR 3738. - Image Analysis - Institut Pasteur

Open Graph Description: Tools developed and maintained by the image analysis engineers of the Image Analysis Hub and the Developmental and Stem Cell Biology Department / CNRS UMR 3738. - Image Analysis - Institut Pasteur

X Description: Tools developed and maintained by the image analysis engineers of the Image Analysis Hub and the Developmental and Stem Cell Biology Department / CNRS UMR 3738. - Image Analysis - Institut Pasteur

Opengraph URL: https://github.com/Image-Analysis-Hub

X: @github

direct link

Domain: github.com

route-pattern/:user_id(.:format)
route-controllerprofiles
route-actionshow
fetch-noncev2:90acabff-ead7-f9d7-1501-b0e8cbbc56f1
current-catalog-service-hash4a1c50a83cf6cc4b55b6b9c53e553e3f847c876b87fb333f71f5d05db8f1a7db
request-idBBFE:296525:F6BD7C:14EEF66:6A4C6542
html-safe-nonce0fab4216a427cad23f6fb0f8ff5e7be10be84d3b0827be70fee159510ad21e0f
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJCQkZFOjI5NjUyNTpGNkJEN0M6MTRFRUY2Njo2QTRDNjU0MiIsInZpc2l0b3JfaWQiOiI4ODMyMDkwMjQwMTE1ODI4MDM0IiwicmVnaW9uX2VkZ2UiOiJpYWQiLCJyZWdpb25fcmVuZGVyIjoiaWFkIn0=
visitor-hmac04d542de8e9c08abede367d1792b5736effc11bcb938f4217ae1ac49fcf06dd1
hovercard-subject-tagorganization:141057029
github-keyboard-shortcutscopilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location/
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/Image-Analysis-Hub
twitter:imagehttps://avatars.githubusercontent.com/u/141057029?s=280&v=4
twitter:cardsummary_large_image
og:imagehttps://avatars.githubusercontent.com/u/141057029?s=280&v=4
og:image:altTools developed and maintained by the image analysis engineers of the Image Analysis Hub and the Developmental and Stem Cell Biology Department / CNRS UMR 3738. - Image Analysis - Institut Pasteur
og:site_nameGitHub
og:typeprofile
profile:usernameImage-Analysis-Hub
hostnamegithub.com
expected-hostnamegithub.com
None3d11bb817438277de2a940854450e83a7d32b6aeb5014e9e6b00a6423900251c
turbo-cache-controlno-preview
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release14099438da5379150f15a2892474c7c7e6c0e55e
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://github.com/Image-Analysis-Hub#start-of-content
https://github.com/
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FImage-Analysis-Hub
Image-Analysis-Hubhttps://github.com/Image-Analysis-Hub
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub Copilot appDirect agents from issue to mergehttps://github.com/features/ai/github-app
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
View all resourceshttps://github.com/resources
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
GitHub Starshttps://stars.github.com
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FImage-Analysis-Hub
Sign up https://github.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Corg-login%3E&source=header
Reloadhttps://github.com/Image-Analysis-Hub
Reloadhttps://github.com/Image-Analysis-Hub
Reloadhttps://github.com/Image-Analysis-Hub
Please reload this pagehttps://github.com/Image-Analysis-Hub
Please reload this pagehttps://github.com/Image-Analysis-Hub
26 followers https://github.com/orgs/Image-Analysis-Hub/followers
https://research.pasteur.fr/en/team/image-analysis-hub/https://research.pasteur.fr/en/team/image-analysis-hub/
Overview https://github.com/Image-Analysis-Hub
Repositories https://github.com/orgs/Image-Analysis-Hub/repositories
Projects https://github.com/orgs/Image-Analysis-Hub/projects
Packages https://github.com/orgs/Image-Analysis-Hub/packages
People https://github.com/orgs/Image-Analysis-Hub/people
Overviewhttps://github.com/Image-Analysis-Hub
Repositorieshttps://github.com/orgs/Image-Analysis-Hub/repositories
Projectshttps://github.com/orgs/Image-Analysis-Hub/projects
Packageshttps://github.com/orgs/Image-Analysis-Hub/packages
Peoplehttps://github.com/orgs/Image-Analysis-Hub/people
README.mdhttps://github.com/Image-Analysis-Hub/.github/tree/master/profile/README.md
https://github.com/Image-Analysis-Hub#image-analysis-tools---institut-pasteur
https://github.com/Image-Analysis-Hub/.github/blob/master/profile/assets/IP_Logo_Noir_RVB.png
https://github.com/Image-Analysis-Hub/.github/blob/master/profile/assets/CNRS-logo.png
Image Analysis Hubhttps://research.pasteur.fr/en/team/image-analysis-hub/
Developmental and Stem Cell Biology Departmenthttps://research.pasteur.fr/en/department/developmental-stem-cell-biology/
Our Toolshttps://github.com/Image-Analysis-Hub#our-tools
https://github.com/clEsperanto
clEsperantohttps://github.com/clEsperanto
https://github.com/Image-Analysis-Hub/DeProj
DeProjhttps://github.com/Image-Analysis-Hub/DeProj
https://github.com/Image-Analysis-Hub/DeXtrusion
DeXtrusionhttps://github.com/Image-Analysis-Hub/DeXtrusion
https://github.com/Image-Analysis-Hub/EpiCure
EpiCurehttps://github.com/Image-Analysis-Hub/EpiCure
https://github.com/Image-Analysis-Hub/LocalZProjector
LocalZProjectorhttps://github.com/Image-Analysis-Hub/LocalZProjector
https://github.com/trackmate-sc/MaMuT
MaMuThttps://github.com/trackmate-sc/MaMuT
https://github.com/mastodon-sc/mastodon
Mastodonhttps://github.com/mastodon-sc/mastodon
https://github.com/multiview-stitcher/multiview-stitcher
Multiview-Stitcherhttps://github.com/multiview-stitcher/multiview-stitcher
https://github.com/image-Analysis-Hub/pycellin
Pycellinhttps://github.com/image-Analysis-Hub/pycellin
https://github.com/trackmate-sc/TrackMate
TrackMatehttps://github.com/trackmate-sc/TrackMate
Scientific software platformshttps://github.com/Image-Analysis-Hub#scientific-software-platforms
https://icy.bioimageanalysis.org/
Icyhttps://icy.bioimageanalysis.org/
https://fiji.sc/
Fijihttps://fiji.sc/
https://scipion.i2pc.es/
Scipionhttps://scipion.i2pc.es/
https://github.com/Image-Analysis-Hub/Pasteur-BioImage-Analysis-Course-2025
Pasteur Bioimage Analysis Course 2025https://github.com/Image-Analysis-Hub/Pasteur-BioImage-Analysis-Course-2025
https://github.com/Image-Analysis-Hub/Pasteur-BioImage-Analysis-Course-2026
Pasteur Bioimage Analysis Course 2026https://github.com/Image-Analysis-Hub/Pasteur-BioImage-Analysis-Course-2025
https://github.com/Image-Analysis-Hub#our-tools
clEsperantohttps://github.com/clEsperanto
https://github.com/Image-Analysis-Hub#clesperanto
https://github.com/clEsperanto
https://github.com/clEsperantohttps://github.com/clEsperanto
herehttps://clesperanto.github.io/
Robert Haasehttps://haesleinhuepf.github.io/
CZI EOSS4https://chanzuckerberg.com/eoss/proposals/gpu-accelerating-fiji-and-friends-using-distributed-clij-neubias-style/
DeProjhttps://github.com/Image-Analysis-Hub/DeProj
https://github.com/Image-Analysis-Hub#deproj
https://github.com/Image-Analysis-Hub/DeProj
Documentationhttps://github.com/Image-Analysis-Hub/DeProj?tab=readme-ov-file#citation
https://doi.org/10.1186/s12915-021-01037-whttps://doi.org/10.1186/s12915-021-01037-w
DeXtrusionhttps://github.com/Image-Analysis-Hub/DeXtrusion
https://github.com/Image-Analysis-Hub#dextrusion
https://github.com/Image-Analysis-Hub/DeXtrusion
Documentationhttps://github.com/Image-Analysis-Hub/DeXtrusion?tab=readme-ov-file#-dextrusion
https://doi.org/10.1242/dev.201747https://doi.org/10.1242/dev.201747
EpiCurehttps://github.com/Image-Analysis-Hub/EpiCure
https://github.com/Image-Analysis-Hub#epicure
https://github.com/Image-Analysis-Hub/EpiCure
naparihttps://napari.org/stable/
Documentationhttps://image-analysis-hub.github.io/Epicure/
LocalZProjectorhttps://github.com/Image-Analysis-Hub/LocalZProjector
https://github.com/Image-Analysis-Hub#localzprojector
https://github.com/Image-Analysis-Hub/LocalZProjector
Fijihttps://fiji.sc/
LocalZBackProjectorhttps://github.com/Image-Analysis-Hub/localZBackProjector
Documentationhttps://github.com/Image-Analysis-Hub/LocalZProjector?tab=readme-ov-file#local-z-projector-documentation
https://doi.org/10.1186/s12915-021-01037-whttps://doi.org/10.1186/s12915-021-01037-w
MaMuThttps://github.com/trackmate-sc/MaMuT
https://github.com/Image-Analysis-Hub#mamut
https://github.com/trackmate-sc/MaMuT
Fijihttps://fiji.sc/
BigDataViewerhttps://imagej.net/plugins/bdv
TrackMatehttps://imagej.net/plugins/trackmate
TrackMate orghttp://github.com/trackmate-sc/
Documentationhttps://imagej.net/plugins/mamut/
doi:10.7554/elife.34410https://doi.org/10.7554/elife.34410
Mastodonhttps://github.com/mastodon-sc/mastodon
https://github.com/Image-Analysis-Hub#mastodon
https://github.com/mastodon-sc/mastodon
Mastodon Github orghttps://github.com/mastodon-sc
Documentationhttps://mastodon.readthedocs.io/en/latest/
https://doi.org/10.64898/2025.12.10.693416https://doi.org/10.64898/2025.12.10.693416
Multiview-Stitcherhttps://github.com/multiview-stitcher/multiview-stitcher
https://github.com/Image-Analysis-Hub#multiview-stitcher
https://github.com/multiview-stitcher/multiview-stitcher
Github orghttps://github.com/multiview-stitcher
Documentationhttps://multiview-stitcher.github.io/multiview-stitcher/main/
Pycellinhttps://github.com/image-Analysis-Hub/pycellin
https://github.com/Image-Analysis-Hub#pycellin
https://github.com/image-Analysis-Hub/pycellin
GEFFhttps://github.com/live-image-tracking-tools/geff
TrackMatehttps://github.com/trackmate-sc/TrackMate
https://github.com/Image-Analysis-Hub#trackmate
https://github.com/trackmate-sc/TrackMate
Fijihttps://fiji.sc/
Github repo orghttps://github.com/trackmate-sc
Documentationhttps://imagej.net/plugins/trackmate/
doi:10.1038/s41592-022-01507-1https://www.nature.com/articles/s41592-022-01507-1
doi:10.1016/j.ymeth.2016.09.016https://www.sciencedirect.com/science/article/pii/S1046202316303346
https://github.com/Image-Analysis-Hub#scientific-software-platforms
Icyhttps://icy.bioimageanalysis.org/
https://github.com/Image-Analysis-Hub#icy
https://icy.bioimageanalysis.org/
Fijihttps://fiji.sc/
https://github.com/Image-Analysis-Hub#fiji
https://fiji.sc/
Scipionhttps://scipion.i2pc.es/
https://github.com/Image-Analysis-Hub#scipion
https://scipion.i2pc.es/
pycellin https://github.com/Image-Analysis-Hub/pycellin
24 https://github.com/Image-Analysis-Hub/pycellin/stargazers
Pasteur-BioImage-Analysis-Course-2025 https://github.com/Image-Analysis-Hub/Pasteur-BioImage-Analysis-Course-2025
16 https://github.com/Image-Analysis-Hub/Pasteur-BioImage-Analysis-Course-2025/stargazers
1 https://github.com/Image-Analysis-Hub/Pasteur-BioImage-Analysis-Course-2025/forks
Epicure https://github.com/Image-Analysis-Hub/Epicure
13 https://github.com/Image-Analysis-Hub/Epicure/stargazers
1 https://github.com/Image-Analysis-Hub/Epicure/forks
cellpose-appose https://github.com/Image-Analysis-Hub/cellpose-appose
8 https://github.com/Image-Analysis-Hub/cellpose-appose/stargazers
1 https://github.com/Image-Analysis-Hub/cellpose-appose/forks
Pasteur-BioImage-Analysis-Course-2026 https://github.com/Image-Analysis-Hub/Pasteur-BioImage-Analysis-Course-2026
4 https://github.com/Image-Analysis-Hub/Pasteur-BioImage-Analysis-Course-2026/stargazers
LocalZProjector https://github.com/Image-Analysis-Hub/LocalZProjector
3 https://github.com/Image-Analysis-Hub/LocalZProjector/stargazers
nnInterapposehttps://github.com/Image-Analysis-Hub/nnInterappose
Uh oh! There was an error while loading. Please reload this page. https://github.com/Image-Analysis-Hub/nnInterappose/graphs/commit-activity
Please reload this pagehttps://github.com/Image-Analysis-Hub
2https://github.com/Image-Analysis-Hub/nnInterappose/stargazers
0https://github.com/Image-Analysis-Hub/nnInterappose/issues
0https://github.com/Image-Analysis-Hub/nnInterappose/pulls
cellpose-apposehttps://github.com/Image-Analysis-Hub/cellpose-appose
Uh oh! There was an error while loading. Please reload this page. https://github.com/Image-Analysis-Hub/cellpose-appose/graphs/commit-activity
Please reload this pagehttps://github.com/Image-Analysis-Hub
8https://github.com/Image-Analysis-Hub/cellpose-appose/stargazers
1https://github.com/Image-Analysis-Hub/cellpose-appose/forks
1https://github.com/Image-Analysis-Hub/cellpose-appose/issues
0https://github.com/Image-Analysis-Hub/cellpose-appose/pulls
Epicurehttps://github.com/Image-Analysis-Hub/Epicure
Uh oh! There was an error while loading. Please reload this page. https://github.com/Image-Analysis-Hub/Epicure/graphs/commit-activity
Please reload this pagehttps://github.com/Image-Analysis-Hub
13https://github.com/Image-Analysis-Hub/Epicure/stargazers
1https://github.com/Image-Analysis-Hub/Epicure/forks
0https://github.com/Image-Analysis-Hub/Epicure/issues
0https://github.com/Image-Analysis-Hub/Epicure/pulls
pycellinhttps://github.com/Image-Analysis-Hub/pycellin
Uh oh! There was an error while loading. Please reload this page. https://github.com/Image-Analysis-Hub/pycellin/graphs/commit-activity
Please reload this pagehttps://github.com/Image-Analysis-Hub
24https://github.com/Image-Analysis-Hub/pycellin/stargazers
6https://github.com/Image-Analysis-Hub/pycellin/issues
1https://github.com/Image-Analysis-Hub/pycellin/pulls
.githubhttps://github.com/Image-Analysis-Hub/.github
Uh oh! There was an error while loading. Please reload this page. https://github.com/Image-Analysis-Hub/.github/graphs/commit-activity
Please reload this pagehttps://github.com/Image-Analysis-Hub
0https://github.com/Image-Analysis-Hub/.github/issues
0https://github.com/Image-Analysis-Hub/.github/pulls
Pasteur-BioImage-Analysis-Course-2026https://github.com/Image-Analysis-Hub/Pasteur-BioImage-Analysis-Course-2026
Uh oh! There was an error while loading. Please reload this page. https://github.com/Image-Analysis-Hub/Pasteur-BioImage-Analysis-Course-2026/graphs/commit-activity
Please reload this pagehttps://github.com/Image-Analysis-Hub
4https://github.com/Image-Analysis-Hub/Pasteur-BioImage-Analysis-Course-2026/stargazers
0https://github.com/Image-Analysis-Hub/Pasteur-BioImage-Analysis-Course-2026/issues
0https://github.com/Image-Analysis-Hub/Pasteur-BioImage-Analysis-Course-2026/pulls
Icy-Cellposehttps://github.com/Image-Analysis-Hub/Icy-Cellpose
Uh oh! There was an error while loading. Please reload this page. https://github.com/Image-Analysis-Hub/Icy-Cellpose/graphs/commit-activity
Please reload this pagehttps://github.com/Image-Analysis-Hub
1https://github.com/Image-Analysis-Hub/Icy-Cellpose/stargazers
0https://github.com/Image-Analysis-Hub/Icy-Cellpose/issues
0https://github.com/Image-Analysis-Hub/Icy-Cellpose/pulls
yolo-apposehttps://github.com/Image-Analysis-Hub/yolo-appose
Uh oh! There was an error while loading. Please reload this page. https://github.com/Image-Analysis-Hub/yolo-appose/graphs/commit-activity
Please reload this pagehttps://github.com/Image-Analysis-Hub
2https://github.com/Image-Analysis-Hub/yolo-appose/stargazers
0https://github.com/Image-Analysis-Hub/yolo-appose/issues
0https://github.com/Image-Analysis-Hub/yolo-appose/pulls
bigfish-apposehttps://github.com/Image-Analysis-Hub/bigfish-appose
Uh oh! There was an error while loading. Please reload this page. https://github.com/Image-Analysis-Hub/bigfish-appose/graphs/commit-activity
Please reload this pagehttps://github.com/Image-Analysis-Hub
0https://github.com/Image-Analysis-Hub/bigfish-appose/issues
0https://github.com/Image-Analysis-Hub/bigfish-appose/pulls
dextrusion-apposehttps://github.com/Image-Analysis-Hub/dextrusion-appose
Uh oh! There was an error while loading. Please reload this page. https://github.com/Image-Analysis-Hub/dextrusion-appose/graphs/commit-activity
Please reload this pagehttps://github.com/Image-Analysis-Hub
0https://github.com/Image-Analysis-Hub/dextrusion-appose/issues
0https://github.com/Image-Analysis-Hub/dextrusion-appose/pulls
View all repositorieshttps://github.com/orgs/Image-Analysis-Hub/repositories?type=all
People https://github.com/orgs/Image-Analysis-Hub/people
https://github.com/StRigaud
https://github.com/m-albert
https://github.com/lxenard
https://github.com/gletort
Please reload this pagehttps://github.com/Image-Analysis-Hub
Please reload this pagehttps://github.com/Image-Analysis-Hub
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width

URLs of crawlers that visited me.