René's URL Explorer Experiment


Title: GitHub - ISYSLAB-HUST/SSAlign: SSAlign · GitHub

Open Graph Title: GitHub - ISYSLAB-HUST/SSAlign: SSAlign

X Title: GitHub - ISYSLAB-HUST/SSAlign: SSAlign

Description: SSAlign. Contribute to ISYSLAB-HUST/SSAlign development by creating an account on GitHub.

Open Graph Description: SSAlign. Contribute to ISYSLAB-HUST/SSAlign development by creating an account on GitHub.

X Description: SSAlign. Contribute to ISYSLAB-HUST/SSAlign development by creating an account on GitHub.

Opengraph URL: https://github.com/ISYSLAB-HUST/SSAlign

X: @github

direct link

Domain: github.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:ded1074c-df52-2c18-3786-1cbeef5cee5f
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idA0F8:147F26:3632C5:4B6949:6A4BC708
html-safe-nonce46022647d5e45e0cac8ee43b5dcb558a2bbc68f3d18263db021d35ac8f199f69
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJBMEY4OjE0N0YyNjozNjMyQzU6NEI2OTQ5OjZBNEJDNzA4IiwidmlzaXRvcl9pZCI6IjY0NTA4NjQ2NzM5MTczNTU2MCIsInJlZ2lvbl9lZGdlIjoiaWFkIiwicmVnaW9uX3JlbmRlciI6ImlhZCJ9
visitor-hmaccbc46991d8744a06cd4870326ef368d8b434543dc812e353503194d01bba244a
hovercard-subject-tagrepository:929761072
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/ISYSLAB-HUST/SSAlign
twitter:imagehttps://opengraph.githubassets.com/532d6be19cf25be6792a589cb77d26684646ee98df2e7d87f542bca3c95ffac9/ISYSLAB-HUST/SSAlign
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/532d6be19cf25be6792a589cb77d26684646ee98df2e7d87f542bca3c95ffac9/ISYSLAB-HUST/SSAlign
og:image:altSSAlign. Contribute to ISYSLAB-HUST/SSAlign development by creating an account on GitHub.
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None14aa00ce5bdb34d0eefb5facbffd7de9e144c688d8a93ef8df902d5f94b51dd7
turbo-cache-controlno-cache
go-importgithub.com/ISYSLAB-HUST/SSAlign git https://github.com/ISYSLAB-HUST/SSAlign.git
octolytics-dimension-user_id58798386
octolytics-dimension-user_loginISYSLAB-HUST
octolytics-dimension-repository_id929761072
octolytics-dimension-repository_nwoISYSLAB-HUST/SSAlign
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id929761072
octolytics-dimension-repository_network_root_nwoISYSLAB-HUST/SSAlign
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release58b8f89190447502561829f30862aa0a99d53367
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://github.com/ISYSLAB-HUST/SSAlign#start-of-content
https://github.com/
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FISYSLAB-HUST%2FSSAlign
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub Copilot appDirect agents from issue to mergehttps://github.com/features/ai/github-app
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
View all resourceshttps://github.com/resources
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
GitHub Starshttps://stars.github.com
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FISYSLAB-HUST%2FSSAlign
Sign up https://github.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=ISYSLAB-HUST%2FSSAlign
Reloadhttps://github.com/ISYSLAB-HUST/SSAlign
Reloadhttps://github.com/ISYSLAB-HUST/SSAlign
Reloadhttps://github.com/ISYSLAB-HUST/SSAlign
Please reload this pagehttps://github.com/ISYSLAB-HUST/SSAlign
ISYSLAB-HUST https://github.com/ISYSLAB-HUST
SSAlignhttps://github.com/ISYSLAB-HUST/SSAlign
Notifications https://github.com/login?return_to=%2FISYSLAB-HUST%2FSSAlign
Fork 1 https://github.com/login?return_to=%2FISYSLAB-HUST%2FSSAlign
Star 47 https://github.com/login?return_to=%2FISYSLAB-HUST%2FSSAlign
Code https://github.com/ISYSLAB-HUST/SSAlign
Issues 2 https://github.com/ISYSLAB-HUST/SSAlign/issues
Pull requests 0 https://github.com/ISYSLAB-HUST/SSAlign/pulls
Actions https://github.com/ISYSLAB-HUST/SSAlign/actions
Projects https://github.com/ISYSLAB-HUST/SSAlign/projects
Security and quality 0 https://github.com/ISYSLAB-HUST/SSAlign/security
Insights https://github.com/ISYSLAB-HUST/SSAlign/pulse
Code https://github.com/ISYSLAB-HUST/SSAlign
Issues https://github.com/ISYSLAB-HUST/SSAlign/issues
Pull requests https://github.com/ISYSLAB-HUST/SSAlign/pulls
Actions https://github.com/ISYSLAB-HUST/SSAlign/actions
Projects https://github.com/ISYSLAB-HUST/SSAlign/projects
Security and quality https://github.com/ISYSLAB-HUST/SSAlign/security
Insights https://github.com/ISYSLAB-HUST/SSAlign/pulse
https://github.com/ISYSLAB-HUST/SSAlign
Brancheshttps://github.com/ISYSLAB-HUST/SSAlign/branches
Tagshttps://github.com/ISYSLAB-HUST/SSAlign/tags
https://github.com/ISYSLAB-HUST/SSAlign/branches
https://github.com/ISYSLAB-HUST/SSAlign/tags
140 Commitshttps://github.com/ISYSLAB-HUST/SSAlign/commits/main/
https://github.com/ISYSLAB-HUST/SSAlign/commits/main/
.ideahttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/.idea
.ideahttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/.idea
AFDB50https://github.com/ISYSLAB-HUST/SSAlign/tree/main/AFDB50
AFDB50https://github.com/ISYSLAB-HUST/SSAlign/tree/main/AFDB50
SAlignerhttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/SAligner
SAlignerhttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/SAligner
SCOPe40https://github.com/ISYSLAB-HUST/SSAlign/tree/main/SCOPe40
SCOPe40https://github.com/ISYSLAB-HUST/SSAlign/tree/main/SCOPe40
SwissProthttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/SwissProt
SwissProthttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/SwissProt
benchmarkDatahttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/benchmarkData
benchmarkDatahttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/benchmarkData
binhttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/bin
binhttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/bin
figurehttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/figure
figurehttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/figure
modelshttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/models
modelshttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/models
pdbDatahttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/pdbData
pdbDatahttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/pdbData
utilshttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/utils
utilshttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/utils
whiteninghttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/whitening
whiteninghttps://github.com/ISYSLAB-HUST/SSAlign/tree/main/whitening
README.mdhttps://github.com/ISYSLAB-HUST/SSAlign/blob/main/README.md
README.mdhttps://github.com/ISYSLAB-HUST/SSAlign/blob/main/README.md
env.yamlhttps://github.com/ISYSLAB-HUST/SSAlign/blob/main/env.yaml
env.yamlhttps://github.com/ISYSLAB-HUST/SSAlign/blob/main/env.yaml
run_SSAlign.pyhttps://github.com/ISYSLAB-HUST/SSAlign/blob/main/run_SSAlign.py
run_SSAlign.pyhttps://github.com/ISYSLAB-HUST/SSAlign/blob/main/run_SSAlign.py
READMEhttps://github.com/ISYSLAB-HUST/SSAlign
https://github.com/ISYSLAB-HUST/SSAlign#ssalign
https://github.com/ISYSLAB-HUST/SSAlign#publications
https://www.biorxiv.org/content/10.1101/2025.07.03.662911v1https://www.biorxiv.org/content/10.1101/2025.07.03.662911v1
https://github.com/ISYSLAB-HUST/SSAlign#overview
https://github.com/ISYSLAB-HUST/SSAlign/blob/main/figure/SSAlign_workflow.png
https://github.com/ISYSLAB-HUST/SSAlign#features
https://github.com/ISYSLAB-HUST/SSAlign#table-of-contents
Installationhttps://github.com/ISYSLAB-HUST/SSAlign#installation
Quick Starthttps://github.com/ISYSLAB-HUST/SSAlign#quick-start
Web Serverhttps://github.com/ISYSLAB-HUST/SSAlign#web-server
Prepare Files for Local Runshttps://github.com/ISYSLAB-HUST/SSAlign#prepare-files-for-local-runs
One-Command Runshttps://github.com/ISYSLAB-HUST/SSAlign#one-command-runs
Important Search Parametershttps://github.com/ISYSLAB-HUST/SSAlign#important-search-parameters
Benchmark Environmenthttps://github.com/ISYSLAB-HUST/SSAlign#benchmark-environment
Numba Compiler (SAligner)https://github.com/ISYSLAB-HUST/SSAlign#numba-compiler-saligner
Multi-GPU Faiss Shardinghttps://github.com/ISYSLAB-HUST/SSAlign#multi-gpu-faiss-sharding
Prefilter Thresholdhttps://github.com/ISYSLAB-HUST/SSAlign#prefilter-threshold
Benchmarkhttps://github.com/ISYSLAB-HUST/SSAlign#benchmark
SwissProt Benchmarkhttps://github.com/ISYSLAB-HUST/SSAlign#swissprot-benchmark
SCOPe40 Benchmarkhttps://github.com/ISYSLAB-HUST/SSAlign#scope40-benchmark
AFDB50 Benchmarkhttps://github.com/ISYSLAB-HUST/SSAlign#afdb50-benchmark
Dataset Downloadhttps://github.com/ISYSLAB-HUST/SSAlign#dataset-download
https://github.com/ISYSLAB-HUST/SSAlign#installation
https://github.com/ISYSLAB-HUST/SSAlign#clone-the-repository
https://github.com/ISYSLAB-HUST/SSAlign#create-and-activate-environment
https://github.com/ISYSLAB-HUST/SSAlign#quick-start
https://github.com/ISYSLAB-HUST/SSAlign#web-server
https://github.com/ISYSLAB-HUST/SSAlign#prepare-files-for-local-runs
https://github.com/ISYSLAB-HUST/SSAlign#one-command-runs
https://github.com/ISYSLAB-HUST/SSAlign#important-search-parameters
https://github.com/ISYSLAB-HUST/SSAlign#benchmark-environment
https://github.com/ISYSLAB-HUST/SSAlign#numba-compiler-saligner
https://github.com/ISYSLAB-HUST/SSAlign#compile-pair_alignpy
https://github.com/ISYSLAB-HUST/SSAlign#example-usage
https://github.com/ISYSLAB-HUST/SSAlign#timing-example-length1000
https://github.com/ISYSLAB-HUST/SSAlign#multi-gpu-faiss-sharding
https://github.com/ISYSLAB-HUST/SSAlign#prefilter-threshold
https://github.com/ISYSLAB-HUST/SSAlign/blob/main/figure/512_2000_cosine_threshold.png
https://github.com/ISYSLAB-HUST/SSAlign#benchmark
https://github.com/ISYSLAB-HUST/SSAlign#swissprot-benchmark
https://github.com/ISYSLAB-HUST/SSAlign#scope40-benchmark
https://github.com/ISYSLAB-HUST/SSAlign#afdb50-benchmark
https://github.com/ISYSLAB-HUST/SSAlign#dataset-download
https://github.com/ISYSLAB-HUST/SSAlign#ssalign-accurately-detects-simple-fold-proteins-missed-by-foldseek
www.biorxiv.org/content/10.1101/2025.07.03.662911v1https://www.biorxiv.org/content/10.1101/2025.07.03.662911v1
protein-structure https://github.com/topics/protein-structure
protein-alignment https://github.com/topics/protein-alignment
Readme https://github.com/ISYSLAB-HUST/SSAlign#readme-ov-file
Please reload this pagehttps://github.com/ISYSLAB-HUST/SSAlign
Activityhttps://github.com/ISYSLAB-HUST/SSAlign/activity
Custom propertieshttps://github.com/ISYSLAB-HUST/SSAlign/custom-properties
1 forkhttps://github.com/ISYSLAB-HUST/SSAlign/forks
Report repository https://github.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FISYSLAB-HUST%2FSSAlign&report=ISYSLAB-HUST+%28user%29
Releaseshttps://github.com/ISYSLAB-HUST/SSAlign/releases
Packages 0https://github.com/orgs/ISYSLAB-HUST/packages?repo_name=SSAlign
Please reload this pagehttps://github.com/ISYSLAB-HUST/SSAlign
Contributorshttps://github.com/ISYSLAB-HUST/SSAlign/graphs/contributors
Please reload this pagehttps://github.com/ISYSLAB-HUST/SSAlign
Python 99.4% https://github.com/ISYSLAB-HUST/SSAlign/search?l=python
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.