René's URL Explorer Experiment


Title: GitHub - Hollfelder-Lab/lrDMS-IRED: Code, data and notebooks for engineering enzymes with ultra-high throughput microfluidics. Please read our accompanying paper for details. · GitHub

Open Graph Title: GitHub - Hollfelder-Lab/lrDMS-IRED: Code, data and notebooks for engineering enzymes with ultra-high throughput microfluidics. Please read our accompanying paper for details.

X Title: GitHub - Hollfelder-Lab/lrDMS-IRED: Code, data and notebooks for engineering enzymes with ultra-high throughput microfluidics. Please read our accompanying paper for details.

Description: Code, data and notebooks for engineering enzymes with ultra-high throughput microfluidics. Please read our accompanying paper for details. - Hollfelder-Lab/lrDMS-IRED

Open Graph Description: Code, data and notebooks for engineering enzymes with ultra-high throughput microfluidics. Please read our accompanying paper for details. - Hollfelder-Lab/lrDMS-IRED

X Description: Code, data and notebooks for engineering enzymes with ultra-high throughput microfluidics. Please read our accompanying paper for details. - Hollfelder-Lab/lrDMS-IRED

Opengraph URL: https://github.com/Hollfelder-Lab/lrDMS-IRED

X: @github

direct link

Domain: github.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:c9cac5a0-f821-3a85-f08d-190152c15453
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-id9046:298DF9:7E8D5:AE5CA:6A4BBCCE
html-safe-nonce2267686fb6f44006dbbc92ef46910f577dc6fdb505d660f22426e9fd4182ec0e
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiI5MDQ2OjI5OERGOTo3RThENTpBRTVDQTo2QTRCQkNDRSIsInZpc2l0b3JfaWQiOiI1ODI4MjQyNjY2NTEzMjE4NzY2IiwicmVnaW9uX2VkZ2UiOiJpYWQiLCJyZWdpb25fcmVuZGVyIjoiaWFkIn0=
visitor-hmacce1763b2941a5e22b4e54526e58c1187e9ac5e3503142ec83ee1f21cb4db492d
hovercard-subject-tagrepository:781396021
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/Hollfelder-Lab/lrDMS-IRED
twitter:imagehttps://opengraph.githubassets.com/fc0ff1f48b2fdba2d740a760572b8357d3184d1cffb9f0218864556c2d93ffd8/Hollfelder-Lab/lrDMS-IRED
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/fc0ff1f48b2fdba2d740a760572b8357d3184d1cffb9f0218864556c2d93ffd8/Hollfelder-Lab/lrDMS-IRED
og:image:altCode, data and notebooks for engineering enzymes with ultra-high throughput microfluidics. Please read our accompanying paper for details. - Hollfelder-Lab/lrDMS-IRED
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
Noneae1c14875555a1dd92bdef45baa6dd9aa796df891e4e471989f7117fe3139fc1
turbo-cache-controlno-cache
go-importgithub.com/Hollfelder-Lab/lrDMS-IRED git https://github.com/Hollfelder-Lab/lrDMS-IRED.git
octolytics-dimension-user_id166155498
octolytics-dimension-user_loginHollfelder-Lab
octolytics-dimension-repository_id781396021
octolytics-dimension-repository_nwoHollfelder-Lab/lrDMS-IRED
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id781396021
octolytics-dimension-repository_network_root_nwoHollfelder-Lab/lrDMS-IRED
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
releaseb15c57117aeff522995a9578e1185f6c45d6c562
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://github.com/Hollfelder-Lab/lrDMS-IRED#start-of-content
https://github.com/
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FHollfelder-Lab%2FlrDMS-IRED
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub Copilot appDirect agents from issue to mergehttps://github.com/features/ai/github-app
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
View all resourceshttps://github.com/resources
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
GitHub Starshttps://stars.github.com
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FHollfelder-Lab%2FlrDMS-IRED
Sign up https://github.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=Hollfelder-Lab%2FlrDMS-IRED
Reloadhttps://github.com/Hollfelder-Lab/lrDMS-IRED
Reloadhttps://github.com/Hollfelder-Lab/lrDMS-IRED
Reloadhttps://github.com/Hollfelder-Lab/lrDMS-IRED
Please reload this pagehttps://github.com/Hollfelder-Lab/lrDMS-IRED
Hollfelder-Lab https://github.com/Hollfelder-Lab
lrDMS-IREDhttps://github.com/Hollfelder-Lab/lrDMS-IRED
Notifications https://github.com/login?return_to=%2FHollfelder-Lab%2FlrDMS-IRED
Fork 2 https://github.com/login?return_to=%2FHollfelder-Lab%2FlrDMS-IRED
Star 11 https://github.com/login?return_to=%2FHollfelder-Lab%2FlrDMS-IRED
Code https://github.com/Hollfelder-Lab/lrDMS-IRED
Issues 0 https://github.com/Hollfelder-Lab/lrDMS-IRED/issues
Pull requests 0 https://github.com/Hollfelder-Lab/lrDMS-IRED/pulls
Actions https://github.com/Hollfelder-Lab/lrDMS-IRED/actions
Projects https://github.com/Hollfelder-Lab/lrDMS-IRED/projects
Security and quality 0 https://github.com/Hollfelder-Lab/lrDMS-IRED/security
Insights https://github.com/Hollfelder-Lab/lrDMS-IRED/pulse
Code https://github.com/Hollfelder-Lab/lrDMS-IRED
Issues https://github.com/Hollfelder-Lab/lrDMS-IRED/issues
Pull requests https://github.com/Hollfelder-Lab/lrDMS-IRED/pulls
Actions https://github.com/Hollfelder-Lab/lrDMS-IRED/actions
Projects https://github.com/Hollfelder-Lab/lrDMS-IRED/projects
Security and quality https://github.com/Hollfelder-Lab/lrDMS-IRED/security
Insights https://github.com/Hollfelder-Lab/lrDMS-IRED/pulse
https://github.com/Hollfelder-Lab/lrDMS-IRED
Brancheshttps://github.com/Hollfelder-Lab/lrDMS-IRED/branches
Tagshttps://github.com/Hollfelder-Lab/lrDMS-IRED/tags
https://github.com/Hollfelder-Lab/lrDMS-IRED/branches
https://github.com/Hollfelder-Lab/lrDMS-IRED/tags
114 Commitshttps://github.com/Hollfelder-Lab/lrDMS-IRED/commits/main/
https://github.com/Hollfelder-Lab/lrDMS-IRED/commits/main/
datahttps://github.com/Hollfelder-Lab/lrDMS-IRED/tree/main/data
datahttps://github.com/Hollfelder-Lab/lrDMS-IRED/tree/main/data
epistasis_combinabilityhttps://github.com/Hollfelder-Lab/lrDMS-IRED/tree/main/epistasis_combinability
epistasis_combinabilityhttps://github.com/Hollfelder-Lab/lrDMS-IRED/tree/main/epistasis_combinability
figshttps://github.com/Hollfelder-Lab/lrDMS-IRED/tree/main/figs
figshttps://github.com/Hollfelder-Lab/lrDMS-IRED/tree/main/figs
notebookshttps://github.com/Hollfelder-Lab/lrDMS-IRED/tree/main/notebooks
notebookshttps://github.com/Hollfelder-Lab/lrDMS-IRED/tree/main/notebooks
scriptshttps://github.com/Hollfelder-Lab/lrDMS-IRED/tree/main/scripts
scriptshttps://github.com/Hollfelder-Lab/lrDMS-IRED/tree/main/scripts
src/lrdmshttps://github.com/Hollfelder-Lab/lrDMS-IRED/tree/main/src/lrdms
src/lrdmshttps://github.com/Hollfelder-Lab/lrDMS-IRED/tree/main/src/lrdms
.env.samplehttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/.env.sample
.env.samplehttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/.env.sample
.gitignorehttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/.gitignore
.gitignorehttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/.gitignore
LICENSEhttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/LICENSE
LICENSEhttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/LICENSE
README.mdhttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/README.md
README.mdhttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/README.md
contribute.shhttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/contribute.sh
contribute.shhttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/contribute.sh
environment.yamlhttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/environment.yaml
environment.yamlhttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/environment.yaml
pyproject.tomlhttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/pyproject.toml
pyproject.tomlhttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/pyproject.toml
READMEhttps://github.com/Hollfelder-Lab/lrDMS-IRED
MIT licensehttps://github.com/Hollfelder-Lab/lrDMS-IRED
https://github.com/Hollfelder-Lab/lrDMS-IRED#microdroplet-screening-rapidly-profiles-a-biocatalyst-to-enable-its-ai-assisted-engineering
https://www.biorxiv.org/content/10.1101/2024.04.08.588565
https://openwetware.org/wiki/DropBase:Devices
https://doi.org/10.5281/zenodo.14544486
https://www.biorxiv.org/content/10.1101/2024.04.08.588565.full.pdf
Microdroplet screening rapidly profiles a biocatalyst to enable its AI-assisted engineeringhttps://www.biorxiv.org/content/10.1101/2024.04.08.588565.full.pdf
https://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/figs/lrdms_workflow.png
https://github.com/Hollfelder-Lab/lrDMS-IRED#-installation
environment.yamlhttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/environment.yaml
pyproject.tomlhttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/pyproject.toml
notebookshttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/notebooks
https://github.com/Hollfelder-Lab/lrDMS-IRED#-usage
https://github.com/Hollfelder-Lab/lrDMS-IRED#raw-data-processing-using-the-umic-seq2-suite-and-dimsum
Zurek et al 2020https://www.nature.com/articles/s41467-020-19687-9
scriptshttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/scripts
DiMSum pipelinehttps://github.com/lehner-lab/DiMSum
datahttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/data
https://github.com/Hollfelder-Lab/lrDMS-IRED#generation-of-a-mutational-profile-combinabiliy-and-mutability
notebooks/data_analysis.ipynbhttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/notebooks/data_analysis.ipynb
https://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/figs/combinability_median_fitness.png
https://github.com/Hollfelder-Lab/lrDMS-IRED#combinability-and-epistasis
epistasishttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/epistasis_combinability
https://github.com/Hollfelder-Lab/lrDMS-IRED#analysis-of-single-and-double-mutant-models
notebookshttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/notebooks
https://github.com/Hollfelder-Lab/lrDMS-IRED#-data
datahttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/data
https://zenodo.org/records/11357236
https://github.com/Hollfelder-Lab/lrDMS-IRED#-license
LICENSEhttps://github.com/Hollfelder-Lab/lrDMS-IRED/blob/main/LICENSE
https://github.com/Hollfelder-Lab/lrDMS-IRED#-citing-this-work
https://github.com/Hollfelder-Lab/lrDMS-IRED#-authors
Hollfelder Labhttps://hollfelder.bioc.cam.ac.uk/
Lio Labhttps://www.cst.cam.ac.uk/people/pl219
https://github.com/Hollfelder-Lab/lrDMS-IRED#-contact
https://github.com/Hollfelder-Lab/lrDMS-IRED#-contributing
hollfelder.bioc.cam.ac.uk/https://hollfelder.bioc.cam.ac.uk/
machine-learning https://github.com/topics/machine-learning
enzyme https://github.com/topics/enzyme
protein https://github.com/topics/protein
microfluidics https://github.com/topics/microfluidics
protein-engineering https://github.com/topics/protein-engineering
enzyme-engineering https://github.com/topics/enzyme-engineering
Readme https://github.com/Hollfelder-Lab/lrDMS-IRED#readme-ov-file
MIT license https://github.com/Hollfelder-Lab/lrDMS-IRED#MIT-1-ov-file
Please reload this pagehttps://github.com/Hollfelder-Lab/lrDMS-IRED
Activityhttps://github.com/Hollfelder-Lab/lrDMS-IRED/activity
Custom propertieshttps://github.com/Hollfelder-Lab/lrDMS-IRED/custom-properties
2 forkshttps://github.com/Hollfelder-Lab/lrDMS-IRED/forks
Report repository https://github.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FHollfelder-Lab%2FlrDMS-IRED&report=Hollfelder-Lab+%28user%29
Releaseshttps://github.com/Hollfelder-Lab/lrDMS-IRED/releases
Packages 0https://github.com/orgs/Hollfelder-Lab/packages?repo_name=lrDMS-IRED
Please reload this pagehttps://github.com/Hollfelder-Lab/lrDMS-IRED
Please reload this pagehttps://github.com/Hollfelder-Lab/lrDMS-IRED
Contributorshttps://github.com/Hollfelder-Lab/lrDMS-IRED/graphs/contributors
Please reload this pagehttps://github.com/Hollfelder-Lab/lrDMS-IRED
Jupyter Notebook 94.3% https://github.com/Hollfelder-Lab/lrDMS-IRED/search?l=jupyter-notebook
Python 5.7% https://github.com/Hollfelder-Lab/lrDMS-IRED/search?l=python
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.