René's URL Explorer Experiment


Title: GitHub - GreenleafLab/array_analysis: Snakemake pipeline for Greenleaf lab array preprocessing. · GitHub

Open Graph Title: GitHub - GreenleafLab/array_analysis: Snakemake pipeline for Greenleaf lab array preprocessing.

X Title: GitHub - GreenleafLab/array_analysis: Snakemake pipeline for Greenleaf lab array preprocessing.

Description: Snakemake pipeline for Greenleaf lab array preprocessing. - GreenleafLab/array_analysis

Open Graph Description: Snakemake pipeline for Greenleaf lab array preprocessing. - GreenleafLab/array_analysis

X Description: Snakemake pipeline for Greenleaf lab array preprocessing. - GreenleafLab/array_analysis

Mail addresses
keyuxi.chn@gmail.com

Opengraph URL: https://github.com/GreenleafLab/array_analysis

X: @github

direct link

Domain: github.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:6f6efdcf-41f6-8488-6c7f-eafd14c8b583
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idE142:490E8:16683BC:1F2072F:6A4DF3AF
html-safe-nonce679d6d8cebdb9905b3fcdd8a60583552a01feff3b2e751915defd5012653af1c
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJFMTQyOjQ5MEU4OjE2NjgzQkM6MUYyMDcyRjo2QTRERjNBRiIsInZpc2l0b3JfaWQiOiIzNDc3MjcwOTQ1NTY2OTQ2MjIzIiwicmVnaW9uX2VkZ2UiOiJpYWQiLCJyZWdpb25fcmVuZGVyIjoiaWFkIn0=
visitor-hmac6907202f66ed24bd6f591b02a2ce5800403da10811efdeb2c3bbd4aa4440ff75
hovercard-subject-tagrepository:745626645
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/GreenleafLab/array_analysis
twitter:imagehttps://opengraph.githubassets.com/e24f923da0ab2109573f0f0553d6c1096deb621f9ddf15937e99f1f4fd5f8f21/GreenleafLab/array_analysis
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/e24f923da0ab2109573f0f0553d6c1096deb621f9ddf15937e99f1f4fd5f8f21/GreenleafLab/array_analysis
og:image:altSnakemake pipeline for Greenleaf lab array preprocessing. - GreenleafLab/array_analysis
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None5818716c93c6a2925b815402541a32814e43a7b1261c322b0c2df75224289566
turbo-cache-controlno-cache
go-importgithub.com/GreenleafLab/array_analysis git https://github.com/GreenleafLab/array_analysis.git
octolytics-dimension-user_id8398169
octolytics-dimension-user_loginGreenleafLab
octolytics-dimension-repository_id745626645
octolytics-dimension-repository_nwoGreenleafLab/array_analysis
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id745626645
octolytics-dimension-repository_network_root_nwoGreenleafLab/array_analysis
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
releasef4bb89367ca678f057d79b1abc45d6675b1bd5b2
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://github.com/GreenleafLab/array_analysis#start-of-content
https://github.com/
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FGreenleafLab%2Farray_analysis
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub Copilot appDirect agents from issue to mergehttps://github.com/features/ai/github-app
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
View all resourceshttps://github.com/resources
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
GitHub Starshttps://stars.github.com
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FGreenleafLab%2Farray_analysis
Sign up https://github.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=GreenleafLab%2Farray_analysis
Reloadhttps://github.com/GreenleafLab/array_analysis
Reloadhttps://github.com/GreenleafLab/array_analysis
Reloadhttps://github.com/GreenleafLab/array_analysis
Please reload this pagehttps://github.com/GreenleafLab/array_analysis
GreenleafLab https://github.com/GreenleafLab
array_analysishttps://github.com/GreenleafLab/array_analysis
Notifications https://github.com/login?return_to=%2FGreenleafLab%2Farray_analysis
Fork 0 https://github.com/login?return_to=%2FGreenleafLab%2Farray_analysis
Star 2 https://github.com/login?return_to=%2FGreenleafLab%2Farray_analysis
Code https://github.com/GreenleafLab/array_analysis
Issues 0 https://github.com/GreenleafLab/array_analysis/issues
Pull requests 0 https://github.com/GreenleafLab/array_analysis/pulls
Actions https://github.com/GreenleafLab/array_analysis/actions
Projects https://github.com/GreenleafLab/array_analysis/projects
Security and quality 0 https://github.com/GreenleafLab/array_analysis/security
Insights https://github.com/GreenleafLab/array_analysis/pulse
Code https://github.com/GreenleafLab/array_analysis
Issues https://github.com/GreenleafLab/array_analysis/issues
Pull requests https://github.com/GreenleafLab/array_analysis/pulls
Actions https://github.com/GreenleafLab/array_analysis/actions
Projects https://github.com/GreenleafLab/array_analysis/projects
Security and quality https://github.com/GreenleafLab/array_analysis/security
Insights https://github.com/GreenleafLab/array_analysis/pulse
https://github.com/GreenleafLab/array_analysis
Brancheshttps://github.com/GreenleafLab/array_analysis/branches
Tagshttps://github.com/GreenleafLab/array_analysis/tags
https://github.com/GreenleafLab/array_analysis/branches
https://github.com/GreenleafLab/array_analysis/tags
59 Commitshttps://github.com/GreenleafLab/array_analysis/commits/main/
https://github.com/GreenleafLab/array_analysis/commits/main/
.snakemakehttps://github.com/GreenleafLab/array_analysis/tree/main/.snakemake
.snakemakehttps://github.com/GreenleafLab/array_analysis/tree/main/.snakemake
array_fitting_tools @ 82cfb0ahttps://github.com/GreenleafLab/array_fitting_tools/tree/82cfb0a775c5cec0605c704535ee32625696535f
array_fitting_tools @ 82cfb0ahttps://github.com/GreenleafLab/array_fitting_tools/tree/82cfb0a775c5cec0605c704535ee32625696535f
confighttps://github.com/GreenleafLab/array_analysis/tree/main/config
confighttps://github.com/GreenleafLab/array_analysis/tree/main/config
datahttps://github.com/GreenleafLab/array_analysis/tree/main/data
datahttps://github.com/GreenleafLab/array_analysis/tree/main/data
envshttps://github.com/GreenleafLab/array_analysis/tree/main/envs
envshttps://github.com/GreenleafLab/array_analysis/tree/main/envs
scriptshttps://github.com/GreenleafLab/array_analysis/tree/main/scripts
scriptshttps://github.com/GreenleafLab/array_analysis/tree/main/scripts
._README.mdhttps://github.com/GreenleafLab/array_analysis/blob/main/._README.md
._README.mdhttps://github.com/GreenleafLab/array_analysis/blob/main/._README.md
.gitignorehttps://github.com/GreenleafLab/array_analysis/blob/main/.gitignore
.gitignorehttps://github.com/GreenleafLab/array_analysis/blob/main/.gitignore
.gitmoduleshttps://github.com/GreenleafLab/array_analysis/blob/main/.gitmodules
.gitmoduleshttps://github.com/GreenleafLab/array_analysis/blob/main/.gitmodules
README.mdhttps://github.com/GreenleafLab/array_analysis/blob/main/README.md
README.mdhttps://github.com/GreenleafLab/array_analysis/blob/main/README.md
Snakefilehttps://github.com/GreenleafLab/array_analysis/blob/main/Snakefile
Snakefilehttps://github.com/GreenleafLab/array_analysis/blob/main/Snakefile
bootstrap_median.shhttps://github.com/GreenleafLab/array_analysis/blob/main/bootstrap_median.sh
bootstrap_median.shhttps://github.com/GreenleafLab/array_analysis/blob/main/bootstrap_median.sh
dag.svghttps://github.com/GreenleafLab/array_analysis/blob/main/dag.svg
dag.svghttps://github.com/GreenleafLab/array_analysis/blob/main/dag.svg
dag_20211223.svghttps://github.com/GreenleafLab/array_analysis/blob/main/dag_20211223.svg
dag_20211223.svghttps://github.com/GreenleafLab/array_analysis/blob/main/dag_20211223.svg
example_pre-array_DAG.svghttps://github.com/GreenleafLab/array_analysis/blob/main/example_pre-array_DAG.svg
example_pre-array_DAG.svghttps://github.com/GreenleafLab/array_analysis/blob/main/example_pre-array_DAG.svg
refine_fit.shhttps://github.com/GreenleafLab/array_analysis/blob/main/refine_fit.sh
refine_fit.shhttps://github.com/GreenleafLab/array_analysis/blob/main/refine_fit.sh
READMEhttps://github.com/GreenleafLab/array_analysis
https://github.com/GreenleafLab/array_analysis#array-analysis-snakemake-workflow
https://github.com/GreenleafLab/array_analysis#setup
https://github.com/GreenleafLab/array_analysis#install-snakemake
https://github.com/GreenleafLab/array_analysis#install-a-snakemake-slurm-profile
https://github.com/GreenleafLab/array_analysis#stanford-sherlock
https://github.com/GreenleafLab/array_analysis#other-clusters
herehttps://snakemake.readthedocs.io/en/v7.19.1/executing/cluster.html
https://github.com/GreenleafLab/array_analysis#using-the-slurm-profile-in-snakefile
https://github.com/GreenleafLab/array_analysis#clone-the-array-analysis-snakemake-workflow-still-under-development-use-with-caution
https://github.com/GreenleafLab/array_analysis#install-flash-if-doing-alignment
https://github.com/GreenleafLab/array_analysis#running-the-workflow
https://github.com/GreenleafLab/array_analysis#high-level-overview
https://github.com/GreenleafLab/array_analysis/blob/main/example_pre-array_DAG.svg
https://github.com/GreenleafLab/array_analysis#tell-snakemake-which-configuration-file-to-use
https://github.com/GreenleafLab/array_analysis#modifying-the-configuration-file
https://github.com/GreenleafLab/array_analysis#sequencing-data-processing
https://github.com/GreenleafLab/array_analysis#imaging-data-processing
https://github.com/GreenleafLab/array_analysis#run-it
Readme https://github.com/GreenleafLab/array_analysis#readme-ov-file
Please reload this pagehttps://github.com/GreenleafLab/array_analysis
Activityhttps://github.com/GreenleafLab/array_analysis/activity
Custom propertieshttps://github.com/GreenleafLab/array_analysis/custom-properties
0 forkshttps://github.com/GreenleafLab/array_analysis/forks
Report repository https://github.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FGreenleafLab%2Farray_analysis&report=GreenleafLab+%28user%29
Releaseshttps://github.com/GreenleafLab/array_analysis/releases
Packages 0https://github.com/orgs/GreenleafLab/packages?repo_name=array_analysis
Please reload this pagehttps://github.com/GreenleafLab/array_analysis
Contributorshttps://github.com/GreenleafLab/array_analysis/graphs/contributors
Please reload this pagehttps://github.com/GreenleafLab/array_analysis
Python 97.8% https://github.com/GreenleafLab/array_analysis/search?l=python
Shell 1.8% https://github.com/GreenleafLab/array_analysis/search?l=shell
Roff 0.4% https://github.com/GreenleafLab/array_analysis/search?l=roff
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.