René's URL Explorer Experiment


Title: GitHub - Geo-omics/scripts: Metagenomic pipeline and other general scripts used in the lab. · GitHub

Open Graph Title: GitHub - Geo-omics/scripts: Metagenomic pipeline and other general scripts used in the lab.

X Title: GitHub - Geo-omics/scripts: Metagenomic pipeline and other general scripts used in the lab.

Description: Metagenomic pipeline and other general scripts used in the lab. - Geo-omics/scripts

Open Graph Description: Metagenomic pipeline and other general scripts used in the lab. - Geo-omics/scripts

X Description: Metagenomic pipeline and other general scripts used in the lab. - Geo-omics/scripts

Mail addresses
geo-omics-scripts@umich.edu

Opengraph URL: https://github.com/Geo-omics/scripts

X: @github

direct link

Domain: github.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:201def13-a1a9-fe6a-a12e-5692f4fd454f
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idC98C:8377:20D578:2CF54C:6A4C6B3B
html-safe-noncee94596ee3aa68e59aaebb191993f69569cd97015e410272727a5e7aeecdb5620
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJDOThDOjgzNzc6MjBENTc4OjJDRjU0Qzo2QTRDNkIzQiIsInZpc2l0b3JfaWQiOiIzOTM1MTY3NDQ2MzMxOTc2NTA3IiwicmVnaW9uX2VkZ2UiOiJpYWQiLCJyZWdpb25fcmVuZGVyIjoiaWFkIn0=
visitor-hmaca25a66434bcbd0d75c6f8649a8bc73c3cf24ebafda645dc934285ca29653c083
hovercard-subject-tagrepository:9699553
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/Geo-omics/scripts
twitter:imagehttps://opengraph.githubassets.com/1ddc7b4ec574d9167e48afdfe4d0f70291508159c05e2797e7dcd184f27d7c5b/Geo-omics/scripts
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/1ddc7b4ec574d9167e48afdfe4d0f70291508159c05e2797e7dcd184f27d7c5b/Geo-omics/scripts
og:image:altMetagenomic pipeline and other general scripts used in the lab. - Geo-omics/scripts
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None3d11bb817438277de2a940854450e83a7d32b6aeb5014e9e6b00a6423900251c
turbo-cache-controlno-cache
go-importgithub.com/Geo-omics/scripts git https://github.com/Geo-omics/scripts.git
octolytics-dimension-user_id4249474
octolytics-dimension-user_loginGeo-omics
octolytics-dimension-repository_id9699553
octolytics-dimension-repository_nwoGeo-omics/scripts
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id9699553
octolytics-dimension-repository_network_root_nwoGeo-omics/scripts
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release14099438da5379150f15a2892474c7c7e6c0e55e
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://github.com/Geo-omics/scripts#start-of-content
https://github.com/
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FGeo-omics%2Fscripts
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub Copilot appDirect agents from issue to mergehttps://github.com/features/ai/github-app
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
View all resourceshttps://github.com/resources
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
GitHub Starshttps://stars.github.com
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FGeo-omics%2Fscripts
Sign up https://github.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=Geo-omics%2Fscripts
Reloadhttps://github.com/Geo-omics/scripts
Reloadhttps://github.com/Geo-omics/scripts
Reloadhttps://github.com/Geo-omics/scripts
Please reload this pagehttps://github.com/Geo-omics/scripts
Geo-omics https://github.com/Geo-omics
scriptshttps://github.com/Geo-omics/scripts
Notifications https://github.com/login?return_to=%2FGeo-omics%2Fscripts
Fork 22 https://github.com/login?return_to=%2FGeo-omics%2Fscripts
Star 36 https://github.com/login?return_to=%2FGeo-omics%2Fscripts
Code https://github.com/Geo-omics/scripts
Issues 2 https://github.com/Geo-omics/scripts/issues
Pull requests 0 https://github.com/Geo-omics/scripts/pulls
Actions https://github.com/Geo-omics/scripts/actions
Projects https://github.com/Geo-omics/scripts/projects
Wiki https://github.com/Geo-omics/scripts/wiki
Security and quality 0 https://github.com/Geo-omics/scripts/security
Insights https://github.com/Geo-omics/scripts/pulse
Code https://github.com/Geo-omics/scripts
Issues https://github.com/Geo-omics/scripts/issues
Pull requests https://github.com/Geo-omics/scripts/pulls
Actions https://github.com/Geo-omics/scripts/actions
Projects https://github.com/Geo-omics/scripts/projects
Wiki https://github.com/Geo-omics/scripts/wiki
Security and quality https://github.com/Geo-omics/scripts/security
Insights https://github.com/Geo-omics/scripts/pulse
https://github.com/Geo-omics/scripts
Brancheshttps://github.com/Geo-omics/scripts/branches
Tagshttps://github.com/Geo-omics/scripts/tags
https://github.com/Geo-omics/scripts/branches
https://github.com/Geo-omics/scripts/tags
1,187 Commitshttps://github.com/Geo-omics/scripts/commits/master/
https://github.com/Geo-omics/scripts/commits/master/
bash-completionhttps://github.com/Geo-omics/scripts/tree/master/bash-completion
bash-completionhttps://github.com/Geo-omics/scripts/tree/master/bash-completion
docshttps://github.com/Geo-omics/scripts/tree/master/docs
docshttps://github.com/Geo-omics/scripts/tree/master/docs
libhttps://github.com/Geo-omics/scripts/tree/master/lib
libhttps://github.com/Geo-omics/scripts/tree/master/lib
modulefileshttps://github.com/Geo-omics/scripts/tree/master/modulefiles
modulefileshttps://github.com/Geo-omics/scripts/tree/master/modulefiles
scriptshttps://github.com/Geo-omics/scripts/tree/master/scripts
scriptshttps://github.com/Geo-omics/scripts/tree/master/scripts
testhttps://github.com/Geo-omics/scripts/tree/master/test
testhttps://github.com/Geo-omics/scripts/tree/master/test
.gitignorehttps://github.com/Geo-omics/scripts/blob/master/.gitignore
.gitignorehttps://github.com/Geo-omics/scripts/blob/master/.gitignore
COPYINGhttps://github.com/Geo-omics/scripts/blob/master/COPYING
COPYINGhttps://github.com/Geo-omics/scripts/blob/master/COPYING
Makefilehttps://github.com/Geo-omics/scripts/blob/master/Makefile
Makefilehttps://github.com/Geo-omics/scripts/blob/master/Makefile
README.mdhttps://github.com/Geo-omics/scripts/blob/master/README.md
README.mdhttps://github.com/Geo-omics/scripts/blob/master/README.md
TruSeq3-PE-2+omics.fahttps://github.com/Geo-omics/scripts/blob/master/TruSeq3-PE-2%2Bomics.fa
TruSeq3-PE-2+omics.fahttps://github.com/Geo-omics/scripts/blob/master/TruSeq3-PE-2%2Bomics.fa
help2rsthttps://github.com/Geo-omics/scripts/blob/master/help2rst
help2rsthttps://github.com/Geo-omics/scripts/blob/master/help2rst
localenvhttps://github.com/Geo-omics/scripts/blob/master/localenv
localenvhttps://github.com/Geo-omics/scripts/blob/master/localenv
phylosiftrchttps://github.com/Geo-omics/scripts/blob/master/phylosiftrc
phylosiftrchttps://github.com/Geo-omics/scripts/blob/master/phylosiftrc
READMEhttps://github.com/Geo-omics/scripts
GPL-3.0 licensehttps://github.com/Geo-omics/scripts
https://github.com/Geo-omics/scripts#michigan-geomicrobiology-lab
Perlhttp://www.perl.org/
Pythonhttps://www.python.org/
issueshttps://github.com/Geo-omics/scripts/issues
https://github.com/Geo-omics/scripts#language-and-os-dependencies
https://github.com/Geo-omics/scripts#contact
https://github.com/Geo-omics/scripts#principal-investigator
Gregory J. Dickhttps://sites.lsa.umich.edu/geomicro/
https://github.com/Geo-omics/scripts#license
https://github.com/Geo-omics/scripts#disclaimer
sites.lsa.umich.edu/geomicro/https://sites.lsa.umich.edu/geomicro/
python https://github.com/topics/python
perl https://github.com/topics/perl
microbiology https://github.com/topics/microbiology
umich https://github.com/topics/umich
ngs-analysis https://github.com/topics/ngs-analysis
geomicrobiology https://github.com/topics/geomicrobiology
Readme https://github.com/Geo-omics/scripts#readme-ov-file
GPL-3.0 license https://github.com/Geo-omics/scripts#GPL-3.0-1-ov-file
Please reload this pagehttps://github.com/Geo-omics/scripts
Activityhttps://github.com/Geo-omics/scripts/activity
Custom propertieshttps://github.com/Geo-omics/scripts/custom-properties
22 forkshttps://github.com/Geo-omics/scripts/forks
Report repository https://github.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FGeo-omics%2Fscripts&report=Geo-omics+%28user%29
Releases 1https://github.com/Geo-omics/scripts/releases
Publication release AEM 2022 Latest Jul 17, 2023 https://github.com/Geo-omics/scripts/releases/tag/v1.0.0
Packages 0https://github.com/orgs/Geo-omics/packages?repo_name=scripts
Please reload this pagehttps://github.com/Geo-omics/scripts
Please reload this pagehttps://github.com/Geo-omics/scripts
Contributorshttps://github.com/Geo-omics/scripts/graphs/contributors
Please reload this pagehttps://github.com/Geo-omics/scripts
Perl 63.7% https://github.com/Geo-omics/scripts/search?l=perl
Python 25.2% https://github.com/Geo-omics/scripts/search?l=python
Shell 9.5% https://github.com/Geo-omics/scripts/search?l=shell
Makefile 1.4% https://github.com/Geo-omics/scripts/search?l=makefile
XSLT 0.2% https://github.com/Geo-omics/scripts/search?l=xslt
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.