René's URL Explorer Experiment


Title: GitHub - FridrichMethod/mdpp: Molecular dynamics pre- and post-processing toolkit. · GitHub

Open Graph Title: GitHub - FridrichMethod/mdpp: Molecular dynamics pre- and post-processing toolkit.

X Title: GitHub - FridrichMethod/mdpp: Molecular dynamics pre- and post-processing toolkit.

Description: Molecular dynamics pre- and post-processing toolkit. - FridrichMethod/mdpp

Open Graph Description: Molecular dynamics pre- and post-processing toolkit. - FridrichMethod/mdpp

X Description: Molecular dynamics pre- and post-processing toolkit. - FridrichMethod/mdpp

Opengraph URL: https://github.com/FridrichMethod/mdpp

X: @github

direct link

Domain: github.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:4ebc9f1a-3c2c-e667-dc4a-526f2be4f73a
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idED3A:9609B:2075ECE:2EDE175:6A4D0B58
html-safe-noncea8f30444fe192117edddf2c6dd689ce23d68fe6e5b8e5ffed400938c0cc1ee54
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJFRDNBOjk2MDlCOjIwNzVFQ0U6MkVERTE3NTo2QTREMEI1OCIsInZpc2l0b3JfaWQiOiIxMjA2MTY2OTUwMzk4MjAwNjY0IiwicmVnaW9uX2VkZ2UiOiJpYWQiLCJyZWdpb25fcmVuZGVyIjoiaWFkIn0=
visitor-hmacf51af6b80d71aff4913eead4d7fb7362e00fb8d434ed153cccc54b6740fb5e1f
hovercard-subject-tagrepository:1071034641
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/FridrichMethod/mdpp
twitter:imagehttps://opengraph.githubassets.com/b57b38b7f57988fbb30f67a6f7f9e84716ad7f16b99270f31ac06d325603ac4e/FridrichMethod/mdpp
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/b57b38b7f57988fbb30f67a6f7f9e84716ad7f16b99270f31ac06d325603ac4e/FridrichMethod/mdpp
og:image:altMolecular dynamics pre- and post-processing toolkit. - FridrichMethod/mdpp
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
Nonebcb4661e6fb4fe8b394c51ea02ccdb2236d40dc59afc75a3bbba50bf6517134c
turbo-cache-controlno-cache
go-importgithub.com/FridrichMethod/mdpp git https://github.com/FridrichMethod/mdpp.git
octolytics-dimension-user_id99899390
octolytics-dimension-user_loginFridrichMethod
octolytics-dimension-repository_id1071034641
octolytics-dimension-repository_nwoFridrichMethod/mdpp
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id1071034641
octolytics-dimension-repository_network_root_nwoFridrichMethod/mdpp
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
releasefb70bd3c4b2bec429781b65419e912c66e2d5581
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://github.com/FridrichMethod/mdpp#start-of-content
https://github.com/
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FFridrichMethod%2Fmdpp
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub Copilot appDirect agents from issue to mergehttps://github.com/features/ai/github-app
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
View all resourceshttps://github.com/resources
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
GitHub Starshttps://stars.github.com
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FFridrichMethod%2Fmdpp
Sign up https://github.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=FridrichMethod%2Fmdpp
Reloadhttps://github.com/FridrichMethod/mdpp
Reloadhttps://github.com/FridrichMethod/mdpp
Reloadhttps://github.com/FridrichMethod/mdpp
FridrichMethod https://github.com/FridrichMethod
mdpphttps://github.com/FridrichMethod/mdpp
Notifications https://github.com/login?return_to=%2FFridrichMethod%2Fmdpp
Fork 0 https://github.com/login?return_to=%2FFridrichMethod%2Fmdpp
Star 2 https://github.com/login?return_to=%2FFridrichMethod%2Fmdpp
Code https://github.com/FridrichMethod/mdpp
Issues 0 https://github.com/FridrichMethod/mdpp/issues
Pull requests 0 https://github.com/FridrichMethod/mdpp/pulls
Actions https://github.com/FridrichMethod/mdpp/actions
Projects https://github.com/FridrichMethod/mdpp/projects
Security and quality 0 https://github.com/FridrichMethod/mdpp/security
Insights https://github.com/FridrichMethod/mdpp/pulse
Code https://github.com/FridrichMethod/mdpp
Issues https://github.com/FridrichMethod/mdpp/issues
Pull requests https://github.com/FridrichMethod/mdpp/pulls
Actions https://github.com/FridrichMethod/mdpp/actions
Projects https://github.com/FridrichMethod/mdpp/projects
Security and quality https://github.com/FridrichMethod/mdpp/security
Insights https://github.com/FridrichMethod/mdpp/pulse
https://github.com/FridrichMethod/mdpp
Brancheshttps://github.com/FridrichMethod/mdpp/branches
Tagshttps://github.com/FridrichMethod/mdpp/tags
https://github.com/FridrichMethod/mdpp/branches
https://github.com/FridrichMethod/mdpp/tags
407 Commitshttps://github.com/FridrichMethod/mdpp/commits/main/
https://github.com/FridrichMethod/mdpp/commits/main/
.cursor/ruleshttps://github.com/FridrichMethod/mdpp/tree/main/.cursor/rules
.cursor/ruleshttps://github.com/FridrichMethod/mdpp/tree/main/.cursor/rules
.github/workflowshttps://github.com/FridrichMethod/mdpp/tree/main/.github/workflows
.github/workflowshttps://github.com/FridrichMethod/mdpp/tree/main/.github/workflows
.vscodehttps://github.com/FridrichMethod/mdpp/tree/main/.vscode
.vscodehttps://github.com/FridrichMethod/mdpp/tree/main/.vscode
docshttps://github.com/FridrichMethod/mdpp/tree/main/docs
docshttps://github.com/FridrichMethod/mdpp/tree/main/docs
exampleshttps://github.com/FridrichMethod/mdpp/tree/main/examples
exampleshttps://github.com/FridrichMethod/mdpp/tree/main/examples
scriptshttps://github.com/FridrichMethod/mdpp/tree/main/scripts
scriptshttps://github.com/FridrichMethod/mdpp/tree/main/scripts
src/mdpphttps://github.com/FridrichMethod/mdpp/tree/main/src/mdpp
src/mdpphttps://github.com/FridrichMethod/mdpp/tree/main/src/mdpp
testshttps://github.com/FridrichMethod/mdpp/tree/main/tests
testshttps://github.com/FridrichMethod/mdpp/tree/main/tests
.gitignorehttps://github.com/FridrichMethod/mdpp/blob/main/.gitignore
.gitignorehttps://github.com/FridrichMethod/mdpp/blob/main/.gitignore
.pre-commit-config.yamlhttps://github.com/FridrichMethod/mdpp/blob/main/.pre-commit-config.yaml
.pre-commit-config.yamlhttps://github.com/FridrichMethod/mdpp/blob/main/.pre-commit-config.yaml
.readthedocs.yamlhttps://github.com/FridrichMethod/mdpp/blob/main/.readthedocs.yaml
.readthedocs.yamlhttps://github.com/FridrichMethod/mdpp/blob/main/.readthedocs.yaml
AGENTS.mdhttps://github.com/FridrichMethod/mdpp/blob/main/AGENTS.md
AGENTS.mdhttps://github.com/FridrichMethod/mdpp/blob/main/AGENTS.md
CLAUDE.mdhttps://github.com/FridrichMethod/mdpp/blob/main/CLAUDE.md
CLAUDE.mdhttps://github.com/FridrichMethod/mdpp/blob/main/CLAUDE.md
LICENSEhttps://github.com/FridrichMethod/mdpp/blob/main/LICENSE
LICENSEhttps://github.com/FridrichMethod/mdpp/blob/main/LICENSE
README.mdhttps://github.com/FridrichMethod/mdpp/blob/main/README.md
README.mdhttps://github.com/FridrichMethod/mdpp/blob/main/README.md
mkdocs.ymlhttps://github.com/FridrichMethod/mdpp/blob/main/mkdocs.yml
mkdocs.ymlhttps://github.com/FridrichMethod/mdpp/blob/main/mkdocs.yml
pyproject.tomlhttps://github.com/FridrichMethod/mdpp/blob/main/pyproject.toml
pyproject.tomlhttps://github.com/FridrichMethod/mdpp/blob/main/pyproject.toml
setup.shhttps://github.com/FridrichMethod/mdpp/blob/main/setup.sh
setup.shhttps://github.com/FridrichMethod/mdpp/blob/main/setup.sh
READMEhttps://github.com/FridrichMethod/mdpp
MIT licensehttps://github.com/FridrichMethod/mdpp
https://github.com/FridrichMethod/mdpp#mdpp
https://mdpp.readthedocs.io/en/latest/?badge=latest
https://www.python.org/downloads/
https://github.com/FridrichMethod/mdpp/blob/main/LICENSE
https://github.com/astral-sh/ruff
https://mypy-lang.org/
https://github.com/FridrichMethod/mdpp#table-of-contents
Highlightshttps://github.com/FridrichMethod/mdpp#highlights
Installationhttps://github.com/FridrichMethod/mdpp#installation
Quick Starthttps://github.com/FridrichMethod/mdpp#quick-start
Package Structurehttps://github.com/FridrichMethod/mdpp#package-structure
Scriptshttps://github.com/FridrichMethod/mdpp#scripts
Design Philosophyhttps://github.com/FridrichMethod/mdpp#design-philosophy
Dependencieshttps://github.com/FridrichMethod/mdpp#dependencies
Documentationhttps://github.com/FridrichMethod/mdpp#documentation
Contributinghttps://github.com/FridrichMethod/mdpp#contributing
Licensehttps://github.com/FridrichMethod/mdpp#license
https://github.com/FridrichMethod/mdpp#highlights
https://github.com/FridrichMethod/mdpp#installation
https://github.com/FridrichMethod/mdpp#quick-start
https://github.com/FridrichMethod/mdpp#load-analyze-and-plot-in-3-lines
https://github.com/FridrichMethod/mdpp#multi-panel-figures
https://github.com/FridrichMethod/mdpp#cluster-conformations
https://github.com/FridrichMethod/mdpp#parse-gromacs-output
https://github.com/FridrichMethod/mdpp#prepare-a-protein
https://github.com/FridrichMethod/mdpp#cheminformatics
https://github.com/FridrichMethod/mdpp#package-structure
https://github.com/FridrichMethod/mdpp#scripts
https://github.com/FridrichMethod/mdpp#design-philosophy
https://github.com/FridrichMethod/mdpp#dependencies
MDTrajhttps://mdtraj.org
MDAnalysishttps://mdanalysis.org
panedrhttps://github.com/MDAnalysis/panedr
scikit-learnhttps://scikit-learn.org
deeptimehttps://deeptime-ml.github.io
RDKithttps://rdkit.org
Numbahttps://numba.pydata.org
PyTorchhttps://pytorch.org
JAXhttps://jax.readthedocs.io
CuPyhttps://cupy.dev
PROPKAhttps://github.com/jensengroup/propka
BioPythonhttps://biopython.org
matplotlibhttps://matplotlib.org
py3Dmolhttps://3dmol.csb.pitt.edu
nglviewhttps://nglviewer.org
https://github.com/FridrichMethod/mdpp#documentation
mdpp.readthedocs.iohttps://mdpp.readthedocs.io
https://github.com/FridrichMethod/mdpp#contributing
https://github.com/FridrichMethod/mdpp#license
MIThttps://github.com/FridrichMethod/mdpp/blob/main/LICENSE
mdpp.readthedocs.iohttps://mdpp.readthedocs.io
python https://github.com/topics/python
cheminformatics https://github.com/topics/cheminformatics
clustering https://github.com/topics/clustering
structural-biology https://github.com/topics/structural-biology
molecular-dynamics https://github.com/topics/molecular-dynamics
pytorch https://github.com/topics/pytorch
openmm https://github.com/topics/openmm
computational-chemistry https://github.com/topics/computational-chemistry
pca https://github.com/topics/pca
tica https://github.com/topics/tica
rdkit https://github.com/topics/rdkit
numba https://github.com/topics/numba
free-energy https://github.com/topics/free-energy
gromacs https://github.com/topics/gromacs
trajectory-analysis https://github.com/topics/trajectory-analysis
mdtraj https://github.com/topics/mdtraj
cupy https://github.com/topics/cupy
jax https://github.com/topics/jax
md-analysis https://github.com/topics/md-analysis
openfe https://github.com/topics/openfe
Readme https://github.com/FridrichMethod/mdpp#readme-ov-file
MIT license https://github.com/FridrichMethod/mdpp#MIT-1-ov-file
Please reload this pagehttps://github.com/FridrichMethod/mdpp
Activityhttps://github.com/FridrichMethod/mdpp/activity
0 forkshttps://github.com/FridrichMethod/mdpp/forks
Report repository https://github.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FFridrichMethod%2Fmdpp&report=FridrichMethod+%28user%29
Releases 2https://github.com/FridrichMethod/mdpp/releases
v0.2.0 Latest May 16, 2026 https://github.com/FridrichMethod/mdpp/releases/tag/v0.2.0
+ 1 releasehttps://github.com/FridrichMethod/mdpp/releases
Packages 0https://github.com/users/FridrichMethod/packages?repo_name=mdpp
Please reload this pagehttps://github.com/FridrichMethod/mdpp
Please reload this pagehttps://github.com/FridrichMethod/mdpp
Contributorshttps://github.com/FridrichMethod/mdpp/graphs/contributors
Please reload this pagehttps://github.com/FridrichMethod/mdpp
Python 87.7% https://github.com/FridrichMethod/mdpp/search?l=python
Shell 12.3% https://github.com/FridrichMethod/mdpp/search?l=shell
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width

URLs of crawlers that visited me.