René's URL Explorer Experiment


Title: GitHub - DawnEve/scRNAseqCode: scRNA-seq code templates and environments · GitHub

Open Graph Title: GitHub - DawnEve/scRNAseqCode: scRNA-seq code templates and environments

X Title: GitHub - DawnEve/scRNAseqCode: scRNA-seq code templates and environments

Description: scRNA-seq code templates and environments. Contribute to DawnEve/scRNAseqCode development by creating an account on GitHub.

Open Graph Description: scRNA-seq code templates and environments. Contribute to DawnEve/scRNAseqCode development by creating an account on GitHub.

X Description: scRNA-seq code templates and environments. Contribute to DawnEve/scRNAseqCode development by creating an account on GitHub.

Opengraph URL: https://github.com/DawnEve/scRNAseqCode

X: @github

direct link

Domain: github.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:286293a2-8db2-acac-5d5b-bec088e19ed7
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idA6DE:A0835:51A2852:6B08172:6A5D876F
html-safe-noncece17315a3609a393bc74e6743b355f9f6d88004ea4a7878953dc1e17d5ac586f
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJBNkRFOkEwODM1OjUxQTI4NTI6NkIwODE3Mjo2QTVEODc2RiIsInZpc2l0b3JfaWQiOiIyMDMwOTUzOTAxNjYwMjYwOTUiLCJyZWdpb25fZWRnZSI6ImlhZCIsInJlZ2lvbl9yZW5kZXIiOiJpYWQifQ==
visitor-hmacc627564c77334f510c0a2194d3e11dd86dcf5fcb00455014dc096c287301b08e
hovercard-subject-tagrepository:338550366
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/DawnEve/scRNAseqCode
twitter:imagehttps://opengraph.githubassets.com/4e8cfef286b60fd9f675cd1ac3e0f4d64b6c1ec5ce8d5ff54e7627b71a83e7b5/DawnEve/scRNAseqCode
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/4e8cfef286b60fd9f675cd1ac3e0f4d64b6c1ec5ce8d5ff54e7627b71a83e7b5/DawnEve/scRNAseqCode
og:image:altscRNA-seq code templates and environments. Contribute to DawnEve/scRNAseqCode development by creating an account on GitHub.
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None5290d7e14309ad1e76106a9c4237bd1041517e83ea182c8ab756752cb0c6940b
turbo-cache-controlno-cache
go-importgithub.com/DawnEve/scRNAseqCode git https://github.com/DawnEve/scRNAseqCode.git
octolytics-dimension-user_id5974903
octolytics-dimension-user_loginDawnEve
octolytics-dimension-repository_id338550366
octolytics-dimension-repository_nwoDawnEve/scRNAseqCode
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id338550366
octolytics-dimension-repository_network_root_nwoDawnEve/scRNAseqCode
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release9c975978430e9ad293956f2bbdaf153b1bd84a99
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://github.com/DawnEve/scRNAseqCode#start-of-content
https://github.com/
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FDawnEve%2FscRNAseqCode
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub Copilot appDirect agents from issue to mergehttps://github.com/features/ai/github-app
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
View all resourceshttps://github.com/resources
GitHub SponsorsFund open source developershttps://github.com/open-source/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/open-source/accelerator
GitHub Starshttps://stars.github.com
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/enterprise/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FDawnEve%2FscRNAseqCode
Sign up https://github.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=DawnEve%2FscRNAseqCode
Reloadhttps://github.com/DawnEve/scRNAseqCode
Reloadhttps://github.com/DawnEve/scRNAseqCode
Reloadhttps://github.com/DawnEve/scRNAseqCode
DawnEve https://github.com/DawnEve
scRNAseqCodehttps://github.com/DawnEve/scRNAseqCode
Notifications https://github.com/login?return_to=%2FDawnEve%2FscRNAseqCode
Fork 0 https://github.com/login?return_to=%2FDawnEve%2FscRNAseqCode
Star 1 https://github.com/login?return_to=%2FDawnEve%2FscRNAseqCode
Code https://github.com/DawnEve/scRNAseqCode
Issues 2 https://github.com/DawnEve/scRNAseqCode/issues
Pull requests 0 https://github.com/DawnEve/scRNAseqCode/pulls
Actions https://github.com/DawnEve/scRNAseqCode/actions
Projects https://github.com/DawnEve/scRNAseqCode/projects
Wiki https://github.com/DawnEve/scRNAseqCode/wiki
Security and quality 0 https://github.com/DawnEve/scRNAseqCode/security
Insights https://github.com/DawnEve/scRNAseqCode/pulse
Code https://github.com/DawnEve/scRNAseqCode
Issues https://github.com/DawnEve/scRNAseqCode/issues
Pull requests https://github.com/DawnEve/scRNAseqCode/pulls
Actions https://github.com/DawnEve/scRNAseqCode/actions
Projects https://github.com/DawnEve/scRNAseqCode/projects
Wiki https://github.com/DawnEve/scRNAseqCode/wiki
Security and quality https://github.com/DawnEve/scRNAseqCode/security
Insights https://github.com/DawnEve/scRNAseqCode/pulse
https://github.com/DawnEve/scRNAseqCode
Brancheshttps://github.com/DawnEve/scRNAseqCode/branches
Tagshttps://github.com/DawnEve/scRNAseqCode/tags
https://github.com/DawnEve/scRNAseqCode/branches
https://github.com/DawnEve/scRNAseqCode/tags
9 Commitshttps://github.com/DawnEve/scRNAseqCode/commits/master/
https://github.com/DawnEve/scRNAseqCode/commits/master/
R_plot_basehttps://github.com/DawnEve/scRNAseqCode/tree/master/R_plot_base
R_plot_basehttps://github.com/DawnEve/scRNAseqCode/tree/master/R_plot_base
cellCommuhttps://github.com/DawnEve/scRNAseqCode/tree/master/cellCommu
cellCommuhttps://github.com/DawnEve/scRNAseqCode/tree/master/cellCommu
refCodehttps://github.com/DawnEve/scRNAseqCode/tree/master/refCode
refCodehttps://github.com/DawnEve/scRNAseqCode/tree/master/refCode
.gitattributeshttps://github.com/DawnEve/scRNAseqCode/blob/master/.gitattributes
.gitattributeshttps://github.com/DawnEve/scRNAseqCode/blob/master/.gitattributes
.gitignorehttps://github.com/DawnEve/scRNAseqCode/blob/master/.gitignore
.gitignorehttps://github.com/DawnEve/scRNAseqCode/blob/master/.gitignore
ReadMe.txthttps://github.com/DawnEve/scRNAseqCode/blob/master/ReadMe.txt
ReadMe.txthttps://github.com/DawnEve/scRNAseqCode/blob/master/ReadMe.txt
a1_2_seurat_Azimuth_server.R.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/a1_2_seurat_Azimuth_server.R.ipynb
a1_2_seurat_Azimuth_server.R.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/a1_2_seurat_Azimuth_server.R.ipynb
a1_Seurat_PBMC10k.R.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/a1_Seurat_PBMC10k.R.ipynb
a1_Seurat_PBMC10k.R.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/a1_Seurat_PBMC10k.R.ipynb
a2_recluster_PBMC10k.R.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/a2_recluster_PBMC10k.R.ipynb
a2_recluster_PBMC10k.R.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/a2_recluster_PBMC10k.R.ipynb
a3_seurat_visual_fn.R.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/a3_seurat_visual_fn.R.ipynb
a3_seurat_visual_fn.R.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/a3_seurat_visual_fn.R.ipynb
a4_Scanpy.py.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/a4_Scanpy.py.ipynb
a4_Scanpy.py.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/a4_Scanpy.py.ipynb
b12_slingshot.R.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/b12_slingshot.R.ipynb
b12_slingshot.R.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/b12_slingshot.R.ipynb
b1_monocle.R.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/b1_monocle.R.ipynb
b1_monocle.R.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/b1_monocle.R.ipynb
b2_ADV_cell_commu.R.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/b2_ADV_cell_commu.R.ipynb
b2_ADV_cell_commu.R.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/b2_ADV_cell_commu.R.ipynb
b2_sup_CellPhoneDB.py3.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/b2_sup_CellPhoneDB.py3.ipynb
b2_sup_CellPhoneDB.py3.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/b2_sup_CellPhoneDB.py3.ipynb
c1_GO_KEGG.R.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/c1_GO_KEGG.R.ipynb
c1_GO_KEGG.R.ipynbhttps://github.com/DawnEve/scRNAseqCode/blob/master/c1_GO_KEGG.R.ipynb
cellPhoneDB_plot.Rhttps://github.com/DawnEve/scRNAseqCode/blob/master/cellPhoneDB_plot.R
cellPhoneDB_plot.Rhttps://github.com/DawnEve/scRNAseqCode/blob/master/cellPhoneDB_plot.R
changeLog.txthttps://github.com/DawnEve/scRNAseqCode/blob/master/changeLog.txt
changeLog.txthttps://github.com/DawnEve/scRNAseqCode/blob/master/changeLog.txt
READMEhttps://github.com/DawnEve/scRNAseqCode
https://support.10xgenomics.com/single-cell-gene-expression/datasetshttps://support.10xgenomics.com/single-cell-gene-expression/datasets
https://mp.weixin.qq.com/s?__biz=MzAxMDkxODM1Ng==&mid=2247496154&idx=3&sn=d3cfaa4a5b18235e0192619f64641635https://mp.weixin.qq.com/s?__biz=MzAxMDkxODM1Ng==&mid=2247496154&idx=3&sn=d3cfaa4a5b18235e0192619f64641635
https://mp.weixin.qq.com/s?__biz=MzI1Njk4ODE0MQ==&mid=2247488383&idx=1&sn=7b8504ed4449df3a707d1c83ec0b0a7ahttps://mp.weixin.qq.com/s?__biz=MzI1Njk4ODE0MQ==&mid=2247488383&idx=1&sn=7b8504ed4449df3a707d1c83ec0b0a7a
https://data.humancellatlas.org/https://data.humancellatlas.org/
https://cf.10xgenomics.com/samples/cell-exp/4.0.0/SC3_v3_NextGem_SI_PBMC_10K/SC3_v3_NextGem_SI_PBMC_10K_filtered_feature_bc_matrix.tar.gzhttps://cf.10xgenomics.com/samples/cell-exp/4.0.0/SC3_v3_NextGem_SI_PBMC_10K/SC3_v3_NextGem_SI_PBMC_10K_filtered_feature_bc_matrix.tar.gz
https://mp.weixin.qq.com/s?__biz=MzAxMDkxODM1Ng==&mid=2247497665&idx=1&sn=74ac0e87b9689d5df7c0208e1c1dc0achttps://mp.weixin.qq.com/s?__biz=MzAxMDkxODM1Ng==&mid=2247497665&idx=1&sn=74ac0e87b9689d5df7c0208e1c1dc0ac
https://broadinstitute.github.io/2020_scWorkshop/trajectory-analysis.htmlhttps://broadinstitute.github.io/2020_scWorkshop/trajectory-analysis.html
Readme https://github.com/DawnEve/scRNAseqCode#readme-ov-file
Please reload this pagehttps://github.com/DawnEve/scRNAseqCode
Activityhttps://github.com/DawnEve/scRNAseqCode/activity
0 forkshttps://github.com/DawnEve/scRNAseqCode/forks
Report repository https://github.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FDawnEve%2FscRNAseqCode&report=DawnEve+%28user%29
Releases 2https://github.com/DawnEve/scRNAseqCode/releases
Envronment2: Seurat pkg 4.0.0, monocle3 v0.2.3.0 on R4.0.4 Latest Mar 2, 2021 https://github.com/DawnEve/scRNAseqCode/releases/tag/scDocker-monocle3
+ 1 releasehttps://github.com/DawnEve/scRNAseqCode/releases
Packages 0https://github.com/users/DawnEve/packages?repo_name=scRNAseqCode
Please reload this pagehttps://github.com/DawnEve/scRNAseqCode
Contributorshttps://github.com/DawnEve/scRNAseqCode/graphs/contributors
Please reload this pagehttps://github.com/DawnEve/scRNAseqCode
R 100.0% https://github.com/DawnEve/scRNAseqCode/search?l=r
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.