René's URL Explorer Experiment


Title: Fix quickshear edge detection wrap-around issue by using convolution by uturkbey · Pull Request #170 · BrainLesion/preprocessing · GitHub

Open Graph Title: Fix quickshear edge detection wrap-around issue by using convolution by uturkbey · Pull Request #170 · BrainLesion/preprocessing

X Title: Fix quickshear edge detection wrap-around issue by using convolution by uturkbey · Pull Request #170 · BrainLesion/preprocessing

Description: preprocessing tools for multi-modal 3D brain imaging - Fix quickshear edge detection wrap-around issue by using convolution by uturkbey · Pull Request #170 · BrainLesion/preprocessing

Open Graph Description: Bug fix for the edge detection wrap-around issue mentioned in #167: np.roll operations are changed to scipy.ndimage.convolve with a 4-neighborhood Laplacian edge detection kernel. Tested over vari...

X Description: Bug fix for the edge detection wrap-around issue mentioned in #167: np.roll operations are changed to scipy.ndimage.convolve with a 4-neighborhood Laplacian edge detection kernel. Tested over vari...

Opengraph URL: https://github.com/BrainLesion/preprocessing/pull/170

X: @github

direct link

Domain: github.com

route-pattern/_view_fragments/voltron/pull_requests/show/:user_id/:repository/:id/pull_request_layout(.:format)
route-controllervoltron_pull_requests_fragments
route-actionpull_request_layout
fetch-noncev2:660852e5-ab1c-89f5-29a7-9f8fa0902b56
current-catalog-service-hashae870bc5e265a340912cde392f23dad3671a0a881730ffdadd82f2f57d81641b
request-id9A74:282357:2D3E74:3C6355:6A4C6EAE
html-safe-noncef5b89360147ed0794dc3cc7428ad1b0b139015c79cf5fccf7b1749af7f62648c
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiI5QTc0OjI4MjM1NzoyRDNFNzQ6M0M2MzU1OjZBNEM2RUFFIiwidmlzaXRvcl9pZCI6IjYwMzgwODk4MDc5MDg1OTc0MjIiLCJyZWdpb25fZWRnZSI6ImlhZCIsInJlZ2lvbl9yZW5kZXIiOiJpYWQifQ==
visitor-hmacf73f21d40ea3c1e62bec3d436721eb6c793e5d7743ecf01fa312c69ee889ad9a
hovercard-subject-tagpull_request:3218556073
github-keyboard-shortcutsrepository,pull-request-list,pull-request-conversation,pull-request-files-changed,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location///voltron/pull_requests_fragments/pull_request_layout
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/_view_fragments/voltron/pull_requests/show/BrainLesion/preprocessing/170/pull_request_layout
twitter:imagehttps://opengraph.githubassets.com/2cbc9844b53cb05013c021edb0deeb974f00c1d748a900a8f3b52f5b9d21eae4/BrainLesion/preprocessing/pull/170
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/2cbc9844b53cb05013c021edb0deeb974f00c1d748a900a8f3b52f5b9d21eae4/BrainLesion/preprocessing/pull/170
og:image:altBug fix for the edge detection wrap-around issue mentioned in #167: np.roll operations are changed to scipy.ndimage.convolve with a 4-neighborhood Laplacian edge detection kernel. Tested over vari...
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
og:author:usernameuturkbey
hostnamegithub.com
expected-hostnamegithub.com
None3d11bb817438277de2a940854450e83a7d32b6aeb5014e9e6b00a6423900251c
turbo-cache-controlno-cache
go-importgithub.com/BrainLesion/preprocessing git https://github.com/BrainLesion/preprocessing.git
octolytics-dimension-user_id143446642
octolytics-dimension-user_loginBrainLesion
octolytics-dimension-repository_id596733663
octolytics-dimension-repository_nwoBrainLesion/preprocessing
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id596733663
octolytics-dimension-repository_network_root_nwoBrainLesion/preprocessing
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release14099438da5379150f15a2892474c7c7e6c0e55e
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://github.com/BrainLesion/preprocessing/pull/170#start-of-content
https://github.com/
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FBrainLesion%2Fpreprocessing%2Fpull%2F170
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub Copilot appDirect agents from issue to mergehttps://github.com/features/ai/github-app
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
View all resourceshttps://github.com/resources
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
GitHub Starshttps://stars.github.com
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FBrainLesion%2Fpreprocessing%2Fpull%2F170
Sign up https://github.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E%2Fvoltron%2Fpull_requests_fragments%2Fpull_request_layout&source=header-repo&source_repo=BrainLesion%2Fpreprocessing
Reloadhttps://github.com/BrainLesion/preprocessing/pull/170
Reloadhttps://github.com/BrainLesion/preprocessing/pull/170
Reloadhttps://github.com/BrainLesion/preprocessing/pull/170
Please reload this pagehttps://github.com/BrainLesion/preprocessing/pull/170
BrainLesion https://github.com/BrainLesion
preprocessinghttps://github.com/BrainLesion/preprocessing
Notifications https://github.com/login?return_to=%2FBrainLesion%2Fpreprocessing
Fork 9 https://github.com/login?return_to=%2FBrainLesion%2Fpreprocessing
Star 34 https://github.com/login?return_to=%2FBrainLesion%2Fpreprocessing
Code https://github.com/BrainLesion/preprocessing
Issues 10 https://github.com/BrainLesion/preprocessing/issues
Pull requests 4 https://github.com/BrainLesion/preprocessing/pulls
Actions https://github.com/BrainLesion/preprocessing/actions
Projects https://github.com/BrainLesion/preprocessing/projects
Security and quality 0 https://github.com/BrainLesion/preprocessing/security
Insights https://github.com/BrainLesion/preprocessing/pulse
Code https://github.com/BrainLesion/preprocessing
Issues https://github.com/BrainLesion/preprocessing/issues
Pull requests https://github.com/BrainLesion/preprocessing/pulls
Actions https://github.com/BrainLesion/preprocessing/actions
Projects https://github.com/BrainLesion/preprocessing/projects
Security and quality https://github.com/BrainLesion/preprocessing/security
Insights https://github.com/BrainLesion/preprocessing/pulse
neuronflowhttps://github.com/neuronflow
BrainLesion:mainhttps://github.com/BrainLesion/preprocessing/tree/main
uturkbey:167-bug-quickshear-edge-mask-calculation-issuehttps://github.com/uturkbey/preprocessing/tree/167-bug-quickshear-edge-mask-calculation-issue
Conversationhttps://github.com/BrainLesion/preprocessing/pull/170
Commits4 (4)https://github.com/BrainLesion/preprocessing/pull/170/commits
Checkshttps://github.com/BrainLesion/preprocessing/pull/170/checks
Files changedhttps://github.com/BrainLesion/preprocessing/pull/170/files
Fix quickshear edge detection wrap-around issue by using convolutionhttps://github.com/BrainLesion/preprocessing/pull/170#top
neuronflowhttps://github.com/neuronflow
BrainLesion:mainhttps://github.com/BrainLesion/preprocessing/tree/main
uturkbey:167-bug-quickshear-edge-mask-calculation-issuehttps://github.com/uturkbey/preprocessing/tree/167-bug-quickshear-edge-mask-calculation-issue
https://github.com/uturkbey
uturkbeyhttps://github.com/uturkbey
Jan 28, 2026https://github.com/BrainLesion/preprocessing/pull/170#issue-3865147406
#167https://github.com/BrainLesion/preprocessing/issues/167
https://private-user-images.githubusercontent.com/66486430/541590635-8cf336a8-ab98-4634-b508-1fdda30aa7ad.png?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.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.mCsyMC6MTSr9-7CqPBCGhv9_zWWbAfCqhzjpVe5iPx8
Please reload this pagehttps://github.com/BrainLesion/preprocessing/pull/170
https://github.com/uturkbey
Fix quickshear edge detection wrap-around issue by using convolutionhttps://github.com/BrainLesion/preprocessing/pull/170/commits/2ecf8f0e440559bbd45f766eacde8af872e5c391
2ecf8f0https://github.com/BrainLesion/preprocessing/pull/170/commits/2ecf8f0e440559bbd45f766eacde8af872e5c391
https://github.com/neuronflow
neuronflowhttps://github.com/neuronflow
MarcelRosierhttps://github.com/MarcelRosier
nicmuensterhttps://github.com/nicmuenster
January 28, 2026 12:14https://github.com/BrainLesion/preprocessing/pull/170#event-22344354715
https://github.com/uturkbey
uturkbeyhttps://github.com/uturkbey
Jan 28, 2026 https://github.com/BrainLesion/preprocessing/pull/170#ref-issue-3800259421
[BUG] Potential wrong edge_mask calculation and out-of-range indexing issues with QuickShear defacing #167 https://github.com/BrainLesion/preprocessing/issues/167
https://github.com/uturkbey
uturkbeyhttps://github.com/uturkbey
Jan 28, 2026https://github.com/BrainLesion/preprocessing/pull/170#issuecomment-3811019280
#167 (comment)https://github.com/BrainLesion/preprocessing/issues/167#issuecomment-3810993809
Please reload this pagehttps://github.com/BrainLesion/preprocessing/pull/170
https://github.com/neuronflow
neuronflowhttps://github.com/neuronflow
Copilothttps://github.com/apps/copilot-pull-request-reviewer
January 28, 2026 12:49https://github.com/BrainLesion/preprocessing/pull/170#event-22345127827
started reviewinghttps://github.com/BrainLesion/preprocessing/sessions/f7b00adb-9bbd-4243-bc95-d4f30337d12e
neuronflowhttps://github.com/neuronflow
January 28, 2026 12:49https://github.com/BrainLesion/preprocessing/pull/170#event-22345135417
View session https://github.com/BrainLesion/preprocessing/sessions/f7b00adb-9bbd-4243-bc95-d4f30337d12e
https://github.com/neuronflow
neuronflowhttps://github.com/neuronflow
Jan 28, 2026https://github.com/BrainLesion/preprocessing/pull/170#issuecomment-3811129014
Please reload this pagehttps://github.com/BrainLesion/preprocessing/pull/170
@uturkbeyhttps://github.com/uturkbey
Please reload this pagehttps://github.com/BrainLesion/preprocessing/pull/170
https://github.com/apps/copilot-pull-request-reviewer
Copilothttps://github.com/apps/copilot-pull-request-reviewer
Jan 28, 2026 https://github.com/BrainLesion/preprocessing/pull/170#pullrequestreview-3716545203
View reviewed changes https://github.com/BrainLesion/preprocessing/pull/170/files/2ecf8f0e440559bbd45f766eacde8af872e5c391
Copilothttps://github.com/apps/copilot-pull-request-reviewer
https://github.com/BrainLesion/preprocessing/pull/170#pullrequestreview-3716545203
Learn morehttps://docs.github.com/articles/managing-disruptive-comments/#hiding-a-comment
Add Copilot custom instructionshttps://github.com/BrainLesion/preprocessing/new/main/.github/instructions?filename=*.instructions.md
Learn how to get startedhttps://docs.github.com/en/copilot/customizing-copilot/adding-repository-custom-instructions-for-github-copilot
Please reload this pagehttps://github.com/BrainLesion/preprocessing/pull/170
https://github.com/neuronflow
neuronflowhttps://github.com/neuronflow
Jan 28, 2026https://github.com/BrainLesion/preprocessing/pull/170#issuecomment-3811172697
@uturkbeyhttps://github.com/uturkbey
@copilothttps://gh.io/copilot-coding-agent-docs
Please reload this pagehttps://github.com/BrainLesion/preprocessing/pull/170
https://github.com/uturkbey
uturkbeyhttps://github.com/uturkbey
Jan 28, 2026https://github.com/BrainLesion/preprocessing/pull/170#issuecomment-3811220904
@uturkbeyhttps://github.com/uturkbey
Please reload this pagehttps://github.com/BrainLesion/preprocessing/pull/170
uturkbeyhttps://github.com/uturkbey
January 28, 2026 13:22https://github.com/BrainLesion/preprocessing/pull/170#commits-pushed-1fccfa3
https://github.com/uturkbey
Autoformat with blackhttps://github.com/BrainLesion/preprocessing/pull/170/commits/1fccfa3cc3efecf29816d224f2479987a553f8b8
1fccfa3https://github.com/BrainLesion/preprocessing/pull/170/commits/1fccfa3cc3efecf29816d224f2479987a553f8b8
https://github.com/uturkbey
Autoformat with blackhttps://github.com/BrainLesion/preprocessing/pull/170/commits/da7177097bfc032878a1dc746a9030f58bad43f6
da71770https://github.com/BrainLesion/preprocessing/pull/170/commits/da7177097bfc032878a1dc746a9030f58bad43f6
https://github.com/neuronflow
Merge branch 'main' into 167-bug-quickshear-edge-mask-calculation-issuehttps://github.com/BrainLesion/preprocessing/pull/170/commits/91323b3db5a6c2a4e229855d69501e42a73dfdc7
91323b3https://github.com/BrainLesion/preprocessing/pull/170/commits/91323b3db5a6c2a4e229855d69501e42a73dfdc7
https://github.com/neuronflow
neuronflowhttps://github.com/neuronflow
Mar 19, 2026https://github.com/BrainLesion/preprocessing/pull/170#issuecomment-4090298308
@MarcelRosierhttps://github.com/MarcelRosier
@nicmuensterhttps://github.com/nicmuenster
Please reload this pagehttps://github.com/BrainLesion/preprocessing/pull/170
https://github.com/MarcelRosier
MarcelRosierhttps://github.com/MarcelRosier
Mar 19, 2026 https://github.com/BrainLesion/preprocessing/pull/170#pullrequestreview-3975733014
View reviewed changes https://github.com/BrainLesion/preprocessing/pull/170/files/91323b3db5a6c2a4e229855d69501e42a73dfdc7
https://github.com/neuronflow
neuronflowhttps://github.com/neuronflow
Mar 19, 2026https://github.com/BrainLesion/preprocessing/pull/170#issuecomment-4090715905
@nicmuensterhttps://github.com/nicmuenster
Please reload this pagehttps://github.com/BrainLesion/preprocessing/pull/170
https://github.com/neuronflow
neuronflowhttps://github.com/neuronflow
d39e7f4https://github.com/BrainLesion/preprocessing/commit/d39e7f4263bd109ee3c4f0c1655011258ac11d22
Mar 19, 2026https://github.com/BrainLesion/preprocessing/pull/170#event-23720985416
Please reload this pagehttps://github.com/BrainLesion/preprocessing/pull/170
https://github.co/hiddenchars
https://github.com/BrainLesion/preprocessing/pull/{{ revealButtonHref }}
Sign up for freehttps://github.com/join?source=comment-repo
Sign in to commenthttps://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FBrainLesion%2Fpreprocessing%2Fpull%2F170
Copilot code review https://github.com/apps/copilot-pull-request-reviewer
Copilot https://github.com/apps/copilot-pull-request-reviewer
https://github.com/BrainLesion/preprocessing/pull/170/files/2ecf8f0e440559bbd45f766eacde8af872e5c391
https://github.com/MarcelRosier
MarcelRosier https://github.com/MarcelRosier
https://github.com/BrainLesion/preprocessing/pull/170/files/91323b3db5a6c2a4e229855d69501e42a73dfdc7
https://github.com/nicmuenster
nicmuenster https://github.com/nicmuenster
Please reload this pagehttps://github.com/BrainLesion/preprocessing/pull/170
https://github.com/uturkbey
https://github.com/neuronflow
https://github.com/MarcelRosier
https://github.com/apps/copilot-pull-request-reviewer
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.