René's URL Explorer Experiment


Title: Added unique mode by read number (option -UN) by PolinaBevad · Pull Request #108 · AstraZeneca-NGS/VarDictJava · GitHub

Open Graph Title: Added unique mode by read number (option -UN) by PolinaBevad · Pull Request #108 · AstraZeneca-NGS/VarDictJava

X Title: Added unique mode by read number (option -UN) by PolinaBevad · Pull Request #108 · AstraZeneca-NGS/VarDictJava

Description: VarDict Java port. Contribute to AstraZeneca-NGS/VarDictJava development by creating an account on GitHub.

Open Graph Description: This PR adds an additional overlapping mode (-UN option) for skipping reads in Cigar processing. With this option enabled read will be skipped if it is R2 (has SAM flag "second in pair")...

X Description: This PR adds an additional overlapping mode (-UN option) for skipping reads in Cigar processing. With this option enabled read will be skipped if it is R2 (has SAM flag "second in pair&am...

Opengraph URL: https://github.com/AstraZeneca-NGS/VarDictJava/pull/108

X: @github

direct link

Domain: github.com

route-pattern/_view_fragments/voltron/pull_requests/show/:user_id/:repository/:id/pull_request_layout(.:format)
route-controllervoltron_pull_requests_fragments
route-actionpull_request_layout
fetch-noncev2:ce48879a-97d3-0fb0-5c64-9479561dcc9c
current-catalog-service-hashae870bc5e265a340912cde392f23dad3671a0a881730ffdadd82f2f57d81641b
request-idE14C:33615A:30029B8:4098872:6A5DBC4A
html-safe-nonced50c07f85bee2b1fa9e5515373430bf95f1fe0cf4bdd2ba6e6a490f0db26c721
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJFMTRDOjMzNjE1QTozMDAyOUI4OjQwOTg4NzI6NkE1REJDNEEiLCJ2aXNpdG9yX2lkIjoiOTIxMTUyODg4OTY1ODg4MzE0NiIsInJlZ2lvbl9lZGdlIjoiaWFkIiwicmVnaW9uX3JlbmRlciI6ImlhZCJ9
visitor-hmacfca611c0b54d633c7bf863c9eee5023fdad7f88c24d6fe00a91b98c053159c3f
hovercard-subject-tagpull_request:190498849
github-keyboard-shortcutsrepository,pull-request-list,pull-request-conversation,pull-request-files-changed,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location///voltron/pull_requests_fragments/pull_request_layout
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/_view_fragments/voltron/pull_requests/show/AstraZeneca-NGS/VarDictJava/108/pull_request_layout
twitter:imagehttps://opengraph.githubassets.com/023ef602b6dab9dcd87e5d246bd7726ce196f77fdd0188d1174be1c50dd28744/AstraZeneca-NGS/VarDictJava/pull/108
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/023ef602b6dab9dcd87e5d246bd7726ce196f77fdd0188d1174be1c50dd28744/AstraZeneca-NGS/VarDictJava/pull/108
og:image:altThis PR adds an additional overlapping mode (-UN option) for skipping reads in Cigar processing. With this option enabled read will be skipped if it is R2 (has SAM flag "second in pair")...
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
og:author:usernamePolinaBevad
hostnamegithub.com
expected-hostnamegithub.com
None5290d7e14309ad1e76106a9c4237bd1041517e83ea182c8ab756752cb0c6940b
turbo-cache-controlno-cache
go-importgithub.com/AstraZeneca-NGS/VarDictJava git https://github.com/AstraZeneca-NGS/VarDictJava.git
octolytics-dimension-user_id7849971
octolytics-dimension-user_loginAstraZeneca-NGS
octolytics-dimension-repository_id26852732
octolytics-dimension-repository_nwoAstraZeneca-NGS/VarDictJava
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id26852732
octolytics-dimension-repository_network_root_nwoAstraZeneca-NGS/VarDictJava
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release9c975978430e9ad293956f2bbdaf153b1bd84a99
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://github.com/AstraZeneca-NGS/VarDictJava/pull/108#start-of-content
https://github.com/
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FAstraZeneca-NGS%2FVarDictJava%2Fpull%2F108
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub Copilot appDirect agents from issue to mergehttps://github.com/features/ai/github-app
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
View all resourceshttps://github.com/resources
GitHub SponsorsFund open source developershttps://github.com/open-source/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/open-source/accelerator
GitHub Starshttps://stars.github.com
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/enterprise/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FAstraZeneca-NGS%2FVarDictJava%2Fpull%2F108
Sign up https://github.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E%2Fvoltron%2Fpull_requests_fragments%2Fpull_request_layout&source=header-repo&source_repo=AstraZeneca-NGS%2FVarDictJava
Reloadhttps://github.com/AstraZeneca-NGS/VarDictJava/pull/108
Reloadhttps://github.com/AstraZeneca-NGS/VarDictJava/pull/108
Reloadhttps://github.com/AstraZeneca-NGS/VarDictJava/pull/108
Please reload this pagehttps://github.com/AstraZeneca-NGS/VarDictJava/pull/108
AstraZeneca-NGS https://github.com/AstraZeneca-NGS
VarDictJavahttps://github.com/AstraZeneca-NGS/VarDictJava
Notifications https://github.com/login?return_to=%2FAstraZeneca-NGS%2FVarDictJava
Fork 59 https://github.com/login?return_to=%2FAstraZeneca-NGS%2FVarDictJava
Star 141 https://github.com/login?return_to=%2FAstraZeneca-NGS%2FVarDictJava
Code https://github.com/AstraZeneca-NGS/VarDictJava
Issues 64 https://github.com/AstraZeneca-NGS/VarDictJava/issues
Pull requests 4 https://github.com/AstraZeneca-NGS/VarDictJava/pulls
Projects https://github.com/AstraZeneca-NGS/VarDictJava/projects
Wiki https://github.com/AstraZeneca-NGS/VarDictJava/wiki
Security and quality 0 https://github.com/AstraZeneca-NGS/VarDictJava/security
Insights https://github.com/AstraZeneca-NGS/VarDictJava/pulse
Code https://github.com/AstraZeneca-NGS/VarDictJava
Issues https://github.com/AstraZeneca-NGS/VarDictJava/issues
Pull requests https://github.com/AstraZeneca-NGS/VarDictJava/pulls
Projects https://github.com/AstraZeneca-NGS/VarDictJava/projects
Wiki https://github.com/AstraZeneca-NGS/VarDictJava/wiki
Security and quality https://github.com/AstraZeneca-NGS/VarDictJava/security
Insights https://github.com/AstraZeneca-NGS/VarDictJava/pulse
pcingolahttps://github.com/pcingola
AstraZeneca-NGS:masterhttps://github.com/AstraZeneca-NGS/VarDictJava/tree/master
PolinaBevad:unique_mode_by_read_numberhttps://github.com/PolinaBevad/VarDictJava/tree/unique_mode_by_read_number
Conversationhttps://github.com/AstraZeneca-NGS/VarDictJava/pull/108
Commits2 (2)https://github.com/AstraZeneca-NGS/VarDictJava/pull/108/commits
Checkshttps://github.com/AstraZeneca-NGS/VarDictJava/pull/108/checks
Files changedhttps://github.com/AstraZeneca-NGS/VarDictJava/pull/108/files
Added unique mode by read number (option -UN)https://github.com/AstraZeneca-NGS/VarDictJava/pull/108#top
pcingolahttps://github.com/pcingola
AstraZeneca-NGS:masterhttps://github.com/AstraZeneca-NGS/VarDictJava/tree/master
PolinaBevad:unique_mode_by_read_numberhttps://github.com/PolinaBevad/VarDictJava/tree/unique_mode_by_read_number
https://github.com/PolinaBevad
PolinaBevadhttps://github.com/PolinaBevad
May 25, 2018https://github.com/AstraZeneca-NGS/VarDictJava/pull/108#issue-326405176
Please reload this pagehttps://github.com/AstraZeneca-NGS/VarDictJava/pull/108
Please reload this pagehttps://github.com/AstraZeneca-NGS/VarDictJava/pull/108
PolinaBevadhttps://github.com/PolinaBevad
May 25, 2018 09:31https://github.com/AstraZeneca-NGS/VarDictJava/pull/108#commits-pushed-cb84ea4
https://github.com/PolinaBevad
Added additional unique mode for read numbers (-UN)https://github.com/AstraZeneca-NGS/VarDictJava/pull/108/commits/cb84ea4a3209f7ab279511efa31206bad723fc9e
cb84ea4https://github.com/AstraZeneca-NGS/VarDictJava/pull/108/commits/cb84ea4a3209f7ab279511efa31206bad723fc9e
https://github.com/PolinaBevad
Readme updated.https://github.com/AstraZeneca-NGS/VarDictJava/pull/108/commits/5a312fbe556ae0ca2414b405a2b679868ba08182
5a312fbhttps://github.com/AstraZeneca-NGS/VarDictJava/pull/108/commits/5a312fbe556ae0ca2414b405a2b679868ba08182
https://github.com/pcingola
pcingolahttps://github.com/pcingola
2680d40https://github.com/AstraZeneca-NGS/VarDictJava/commit/2680d402f01fa11efc613b9d8b95c0fddd44bb77
Jun 14, 2018https://github.com/AstraZeneca-NGS/VarDictJava/pull/108#event-1681764285
https://github.co/hiddenchars
https://github.com/AstraZeneca-NGS/VarDictJava/pull/{{ revealButtonHref }}
Sign up for freehttps://github.com/join?source=comment-repo
Sign inhttps://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FAstraZeneca-NGS%2FVarDictJava%2Fpull%2F108
Please reload this pagehttps://github.com/AstraZeneca-NGS/VarDictJava/pull/108
https://github.com/PolinaBevad
https://github.com/pcingola
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width

URLs of crawlers that visited me.