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Title: Python API Documentation — OpenProtein-Docs documentation

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Domain: docs.openprotein.ai

Links:

Skip to main contenthttps://docs.openprotein.ai/python-api/#main-content
https://docs.openprotein.ai/index.html
Getting Started https://docs.openprotein.ai/getting-started/index.html
Web App https://docs.openprotein.ai/web-app/index.html
Python API https://docs.openprotein.ai/python-api/
REST API https://docs.openprotein.ai/rest-api/index.html
Walkthroughs https://docs.openprotein.ai/walkthroughs/index.html
Resources https://docs.openprotein.ai/resources/index.html
Log inhttps://app.openprotein.ai/
Contacthttps://www.openprotein.ai/contact
Getting Started https://docs.openprotein.ai/getting-started/index.html
Web App https://docs.openprotein.ai/web-app/index.html
Python API https://docs.openprotein.ai/python-api/
REST API https://docs.openprotein.ai/rest-api/index.html
Walkthroughs https://docs.openprotein.ai/walkthroughs/index.html
Resources https://docs.openprotein.ai/resources/index.html
Log inhttps://app.openprotein.ai/
Contacthttps://www.openprotein.ai/contact
Overviewhttps://docs.openprotein.ai/python-api/
Installationhttps://docs.openprotein.ai/python-api/installation.html
Quickstarthttps://docs.openprotein.ai/python-api/quickstart.html
Foundation Modelshttps://docs.openprotein.ai/python-api/foundation-models/index.html
Model metadatahttps://docs.openprotein.ai/python-api/foundation-models/model-metadata.html
SVD and embeddingshttps://docs.openprotein.ai/python-api/foundation-models/SVD-embeddings.html
Logitshttps://docs.openprotein.ai/python-api/foundation-models/logits.html
Attention mapshttps://docs.openprotein.ai/python-api/foundation-models/attention-maps.html
Using AbLang2https://docs.openprotein.ai/python-api/foundation-models/Using_AbLang2.html
PoEThttps://docs.openprotein.ai/python-api/poet/index.html
Creating an MSAhttps://docs.openprotein.ai/python-api/poet/creating-MSA.html
Creating a prompthttps://docs.openprotein.ai/python-api/poet/creating-prompt.html
Scoring sequenceshttps://docs.openprotein.ai/python-api/poet/scoring-sequences.html
Single site analysishttps://docs.openprotein.ai/python-api/poet/single-site-analysis.html
Generating sequenceshttps://docs.openprotein.ai/python-api/poet/generating-sequences.html
Property Regression Modelshttps://docs.openprotein.ai/python-api/property-regression-models/index.html
Uploading datahttps://docs.openprotein.ai/python-api/property-regression-models/uploading-data.html
Training modelshttps://docs.openprotein.ai/python-api/property-regression-models/training-models.html
Designing sequenceshttps://docs.openprotein.ai/python-api/property-regression-models/designing-sequences.html
Predicting sequenceshttps://docs.openprotein.ai/python-api/property-regression-models/predicting-sequences.html
Single site analysishttps://docs.openprotein.ai/python-api/property-regression-models/single-site-analysis.html
Structure Predictionhttps://docs.openprotein.ai/python-api/structure-prediction/index.html
Examining structure prediction modelshttps://docs.openprotein.ai/python-api/structure-prediction/Examining_structure_prediction_models.html
Using ESMFold2https://docs.openprotein.ai/python-api/structure-prediction/Using_ESMFold2.html
Using AlphaFold2https://docs.openprotein.ai/python-api/structure-prediction/Using_AlphaFold2.html
Using Boltz-1 and Boltz-2https://docs.openprotein.ai/python-api/structure-prediction/Using_Boltz_1_and_Boltz_2.html
Using Protenix-v2https://docs.openprotein.ai/python-api/structure-prediction/Using_Protenix-v2.html
Using RosettaFold-3https://docs.openprotein.ai/python-api/structure-prediction/Using_RosettaFold3.html
Structure Generationhttps://docs.openprotein.ai/python-api/structure-generation/index.html
Using RFdiffusionhttps://docs.openprotein.ai/python-api/structure-generation/Using_RFdiffusion.html
Using BoltzGenhttps://docs.openprotein.ai/python-api/structure-generation/Using_BoltzGen.html
API referencehttps://docs.openprotein.ai/python-api/api-reference/index.html
openproteinhttps://docs.openprotein.ai/python-api/api-reference/openprotein.html
openprotein.moleculeshttps://docs.openprotein.ai/python-api/api-reference/molecules.html
openprotein.datahttps://docs.openprotein.ai/python-api/api-reference/data.html
openprotein.jobshttps://docs.openprotein.ai/python-api/api-reference/jobs.html
openprotein.alignhttps://docs.openprotein.ai/python-api/api-reference/align.html
openprotein.prompthttps://docs.openprotein.ai/python-api/api-reference/prompt.html
openprotein.embeddingshttps://docs.openprotein.ai/python-api/api-reference/embedding.html
openprotein.predictorhttps://docs.openprotein.ai/python-api/api-reference/predictor.html
openprotein.designhttps://docs.openprotein.ai/python-api/api-reference/design.html
openprotein.foldhttps://docs.openprotein.ai/python-api/api-reference/fold.html
openprotein.modelshttps://docs.openprotein.ai/python-api/api-reference/models.html
https://docs.openprotein.ai/index.html
https://pypi.org/project/openprotein-python/
https://anaconda.org/openprotein/openprotein-python
https://github.com/OpenProteinAI/openprotein-python
#https://docs.openprotein.ai/python-api/#python-api-documentation
#https://docs.openprotein.ai/python-api/#getting-started
installation guidehttps://docs.openprotein.ai/python-api/installation.html
session setuphttps://docs.openprotein.ai/python-api/quickstart.html#authentication
#https://docs.openprotein.ai/python-api/#usage
#https://docs.openprotein.ai/python-api/#core-concepts
OpenProteinhttps://docs.openprotein.ai/python-api/api-reference/openprotein.html#openprotein.OpenProtein
Futurehttps://docs.openprotein.ai/python-api/api-reference/jobs.html#openprotein.jobs.Future
wait()https://docs.openprotein.ai/python-api/api-reference/jobs.html#openprotein.jobs.Future.wait
Job Systemhttps://docs.openprotein.ai/python-api/quickstart.html#jobs-system
AssayDatasethttps://docs.openprotein.ai/python-api/api-reference/data.html#openprotein.data.AssayDataset
#https://docs.openprotein.ai/python-api/#platform-capabilities
#https://docs.openprotein.ai/python-api/#foundation-models
Tutorialshttps://docs.openprotein.ai/python-api/foundation-models/index.html
API Referencehttps://docs.openprotein.ai/python-api/api-reference/embedding.html
#https://docs.openprotein.ai/python-api/#poet
PoEThttps://docs.openprotein.ai/python-api/poet/index.html
PoETModelhttps://docs.openprotein.ai/python-api/api-reference/embedding.html#openprotein.embeddings.PoETModel
#https://docs.openprotein.ai/python-api/#data-management
API Referencehttps://docs.openprotein.ai/python-api/api-reference/data.html
#https://docs.openprotein.ai/python-api/#prediction-design
#https://docs.openprotein.ai/python-api/#property-regression-models
Property Regression Modelshttps://docs.openprotein.ai/python-api/property-regression-models/index.html
API Referencehttps://docs.openprotein.ai/python-api/api-reference/predictor.html
#https://docs.openprotein.ai/python-api/#sequence-design
Property Regression Modelshttps://docs.openprotein.ai/python-api/property-regression-models/index.html
API Referencehttps://docs.openprotein.ai/python-api/api-reference/design.html
#https://docs.openprotein.ai/python-api/#structure
#https://docs.openprotein.ai/python-api/#structure-prediction
Structure Predictionhttps://docs.openprotein.ai/python-api/structure-prediction/index.html
API Referencehttps://docs.openprotein.ai/python-api/api-reference/fold.html
#https://docs.openprotein.ai/python-api/#structure-generation
Structure Generationhttps://docs.openprotein.ai/python-api/structure-generation/index.html
API Referencehttps://docs.openprotein.ai/python-api/api-reference/models.html
#https://docs.openprotein.ai/python-api/#supporting-tools
#https://docs.openprotein.ai/python-api/#alignment
API Referencehttps://docs.openprotein.ai/python-api/api-reference/align.html
#https://docs.openprotein.ai/python-api/#dimensionality-reduction
Transform Modelshttps://docs.openprotein.ai/python-api/api-reference/embedding.html#transform-models
#https://docs.openprotein.ai/python-api/#common-workflows
#https://docs.openprotein.ai/python-api/#next-steps
Installationhttps://docs.openprotein.ai/python-api/installation.html
Quickstarthttps://docs.openprotein.ai/python-api/quickstart.html
Job Systemhttps://docs.openprotein.ai/python-api/quickstart.html#jobs-system
Getting Startedhttps://docs.openprotein.ai/python-api/#getting-started
Usagehttps://docs.openprotein.ai/python-api/#usage
Core Conceptshttps://docs.openprotein.ai/python-api/#core-concepts
Platform Capabilitieshttps://docs.openprotein.ai/python-api/#platform-capabilities
Foundation Modelshttps://docs.openprotein.ai/python-api/#foundation-models
PoEThttps://docs.openprotein.ai/python-api/#poet
Data Managementhttps://docs.openprotein.ai/python-api/#data-management
Prediction & Designhttps://docs.openprotein.ai/python-api/#prediction-design
Property Regression Modelshttps://docs.openprotein.ai/python-api/#property-regression-models
Sequence Designhttps://docs.openprotein.ai/python-api/#sequence-design
Structurehttps://docs.openprotein.ai/python-api/#structure
Structure Predictionhttps://docs.openprotein.ai/python-api/#structure-prediction
Structure Generationhttps://docs.openprotein.ai/python-api/#structure-generation
Supporting Toolshttps://docs.openprotein.ai/python-api/#supporting-tools
Alignmenthttps://docs.openprotein.ai/python-api/#alignment
Dimensionality Reductionhttps://docs.openprotein.ai/python-api/#dimensionality-reduction
Common Workflowshttps://docs.openprotein.ai/python-api/#common-workflows
Next Stepshttps://docs.openprotein.ai/python-api/#next-steps
Sphinxhttps://www.sphinx-doc.org/
PyData Sphinx Themehttps://pydata-sphinx-theme.readthedocs.io/en/stable/index.html

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