|
| https://bios2.github.io/index.html |
|
BIOS² Education resources
| https://bios2.github.io/index.html |
|
Home | https://bios2.github.io/index.html |
|
Intensive courses
| https://bios2.github.io |
|
Biodiversity Modelling Summer School 2024 | https://bios2.github.io/summer-schools/v2024/BiodiversityModelling2024.html |
|
Biodiversity Modelling Summer School 2022 | https://bios2.github.io/summer-schools/v2022/BiodiversityModelling2022.html |
|
Biodiversity Modelling Summer School 2021 | https://bios2.github.io/biodiversity_modelling_2021/ |
|
Biodiversity Modelling Summer School 2019 | https://bios2.github.io/summer-schools/v2019/BiodiversityModelling2019.html |
|
About BIOS² | https://bios2.usherbrooke.ca/ |
|
| https://github.com/bios2/bios2.github.io |
|
| https://twitter.com/_bios2 |
| https://bios2.github.io/posts/2021-05-04-building-r-packages/R packages.html |
|
| https://bios2.github.io/posts/2021-05-04-building-r-packages/R packages.html |
| https://bios2.github.io/posts/2021-05-04-building-r-packages/R packages.html |
| Building R packages | https://bios2.github.io/posts/2021-05-04-building-r-packages/R packages.html |
| https://bios2.github.io/posts/2021-05-04-building-r-packages/R packages.html |
| https://bios2.github.io/posts/2021-05-04-building-r-packages/R packages.html |
| https://bios2.github.io/posts/2021-05-04-building-r-packages/R packages.html |
|
| https://bios2.github.io/posts/2021-05-04-building-r-packages/R packages.html |
| https://bios2.github.io/posts/2025-07-06-CSEE-intro-shiny/index.html |
|
| https://bios2.github.io/posts/2025-07-06-CSEE-intro-shiny/index.html |
| https://bios2.github.io/posts/2025-07-06-CSEE-intro-shiny/index.html |
| Introduction to Shiny Apps CSEE | https://bios2.github.io/posts/2025-07-06-CSEE-intro-shiny/index.html |
| https://bios2.github.io/posts/2025-07-06-CSEE-intro-shiny/index.html |
| Introduction to interactive app development with R Shiny. | https://bios2.github.io/posts/2025-07-06-CSEE-intro-shiny/index.html |
|
Jul 6, 2025
Nikki Moore, Andrew MacDonald, Jake Lawlor
| https://bios2.github.io/posts/2025-07-06-CSEE-intro-shiny/index.html |
| https://bios2.github.io/posts/2022-05-19-introduction-to-microbiome-analysis/index.html |
|
| https://bios2.github.io/posts/2022-05-19-introduction-to-microbiome-analysis/index.html |
| https://bios2.github.io/posts/2022-05-19-introduction-to-microbiome-analysis/index.html |
| Introduction to Microbiome Analysis | https://bios2.github.io/posts/2022-05-19-introduction-to-microbiome-analysis/index.html |
| https://bios2.github.io/posts/2022-05-19-introduction-to-microbiome-analysis/index.html |
| This workshop will give an overview of the theory and practice of using metabarcoding approaches to study the diversity of microbial communities. The workshop will give participants an understanding of 1) the current methods for microbiome diversity quantification using metabarcoding/amplicon sequencing approaches and 2) the normalization and diversity analysis approaches that can be used to quantify the diversity of microbial communities. | https://bios2.github.io/posts/2022-05-19-introduction-to-microbiome-analysis/index.html |
|
May 19, 2022
Steven Kembel, Zihui Wang, Salix Dubois
| https://bios2.github.io/posts/2022-05-19-introduction-to-microbiome-analysis/index.html |
| https://bios2.github.io/posts/2021-11-02-introduction-to-gams/index.html |
|
| https://bios2.github.io/posts/2021-11-02-introduction-to-gams/index.html |
| https://bios2.github.io/posts/2021-11-02-introduction-to-gams/index.html |
| Introduction to Generalized Additive Models (GAMs) | https://bios2.github.io/posts/2021-11-02-introduction-to-gams/index.html |
| https://bios2.github.io/posts/2021-11-02-introduction-to-gams/index.html |
| To address the increase in both quantity and complexity of available data, ecologists require flexible, robust statistical models, as well as software to perform such analyses. This workshop will focus on how a single tool, the R mgcv package, can be used to fit Generalized Additive Models (GAMs) to data from a wide range of sources. | https://bios2.github.io/posts/2021-11-02-introduction-to-gams/index.html |
|
Nov 2, 2021
Eric Pedersen
| https://bios2.github.io/posts/2021-11-02-introduction-to-gams/index.html |
| https://bios2.github.io/posts/2021-06-22-introduction-to-shiny-apps/index.html |
|
| https://bios2.github.io/posts/2021-06-22-introduction-to-shiny-apps/index.html |
| https://bios2.github.io/posts/2021-06-22-introduction-to-shiny-apps/index.html |
| Introduction to Shiny Apps | https://bios2.github.io/posts/2021-06-22-introduction-to-shiny-apps/index.html |
| https://bios2.github.io/posts/2021-06-22-introduction-to-shiny-apps/index.html |
| Introduction to interactive app development with R Shiny. | https://bios2.github.io/posts/2021-06-22-introduction-to-shiny-apps/index.html |
|
Jun 22, 2021
Katherine Hébert, Andrew MacDonald, Jake Lawlor, Vincent Bellavance
| https://bios2.github.io/posts/2021-06-22-introduction-to-shiny-apps/index.html |
| https://bios2.github.io/posts/2021-07-19-glm-community-ecology/index.html |
|
| https://bios2.github.io/posts/2021-07-19-glm-community-ecology/index.html |
| https://bios2.github.io/posts/2021-07-19-glm-community-ecology/index.html |
| Generalized Linear Models for Community Ecology | https://bios2.github.io/posts/2021-07-19-glm-community-ecology/index.html |
| https://bios2.github.io/posts/2021-07-19-glm-community-ecology/index.html |
| In this workshop we will explore, discuss, and apply generalized linear models to combine information on species distributions, traits, phylogenies, environmental and landscape variation. We will also discuss inference under spatial and phylogenetic autocorrelation under fixed and random effects implementations. We will discuss technical elements and cover implementations using R. | https://bios2.github.io/posts/2021-07-19-glm-community-ecology/index.html |
|
May 17, 2021
Pedro Peres-Neto
| https://bios2.github.io/posts/2021-07-19-glm-community-ecology/index.html |
| https://bios2.github.io/posts/2021-05-04-building-r-packages/index.html |
|
| https://bios2.github.io/posts/2021-05-04-building-r-packages/index.html |
| https://bios2.github.io/posts/2021-05-04-building-r-packages/index.html |
| Building R packages | https://bios2.github.io/posts/2021-05-04-building-r-packages/index.html |
| https://bios2.github.io/posts/2021-05-04-building-r-packages/index.html |
| This practical training will cover the basics of modern package development in R with a focus on the following three aspects: (1) how to turn your code into functions, (2) how to write tests and documentation, and (3) how to share your R package on GitHub.. | https://bios2.github.io/posts/2021-05-04-building-r-packages/index.html |
|
May 4, 2021
Andrew MacDonald
| https://bios2.github.io/posts/2021-05-04-building-r-packages/index.html |
| https://bios2.github.io/posts/2021-03-25-point-count-data-analysis/index.html |
|
| https://bios2.github.io/posts/2021-03-25-point-count-data-analysis/index.html |
| https://bios2.github.io/posts/2021-03-25-point-count-data-analysis/index.html |
| Point-count Data Analysis | https://bios2.github.io/posts/2021-03-25-point-count-data-analysis/index.html |
| https://bios2.github.io/posts/2021-03-25-point-count-data-analysis/index.html |
| Analysis of point-count data in the presence of variable survey methodologies and detection error offered by Péter Sólymos to BIOS2 Fellows in March 2021. | https://bios2.github.io/posts/2021-03-25-point-count-data-analysis/index.html |
|
Mar 25, 2021
Péter Sólymos
| https://bios2.github.io/posts/2021-03-25-point-count-data-analysis/index.html |
| https://bios2.github.io/posts/2021-01-22-introduction-aux-concepts-edi-en-contexte-scientifique/index.html |
|
| https://bios2.github.io/posts/2021-01-22-introduction-aux-concepts-edi-en-contexte-scientifique/index.html |
| https://bios2.github.io/posts/2021-01-22-introduction-aux-concepts-edi-en-contexte-scientifique/index.html |
| Introduction to EDI Concepts in a Scientific Context | https://bios2.github.io/posts/2021-01-22-introduction-aux-concepts-edi-en-contexte-scientifique/index.html |
| https://bios2.github.io/posts/2021-01-22-introduction-aux-concepts-edi-en-contexte-scientifique/index.html |
| A short introduction to EDI concepts in a scientific context. | https://bios2.github.io/posts/2021-01-22-introduction-aux-concepts-edi-en-contexte-scientifique/index.html |
|
Jan 22, 2021
Agathe Riallan, Marie-José Naud
| https://bios2.github.io/posts/2021-01-22-introduction-aux-concepts-edi-en-contexte-scientifique/index.html |
| https://bios2.github.io/posts/2021-01-12-4-day-training-in-spatial-statistics-with-philippe-marchand/index.html |
|
| https://bios2.github.io/posts/2021-01-12-4-day-training-in-spatial-statistics-with-philippe-marchand/index.html |
| https://bios2.github.io/posts/2021-01-12-4-day-training-in-spatial-statistics-with-philippe-marchand/index.html |
| Spatial Statistics in Ecology | https://bios2.github.io/posts/2021-01-12-4-day-training-in-spatial-statistics-with-philippe-marchand/index.html |
| https://bios2.github.io/posts/2021-01-12-4-day-training-in-spatial-statistics-with-philippe-marchand/index.html |
| Training session about statistical analysis of spatial data in ecology, hosted by Philippe Marchand (UQAT). | Session de formation sur l’analyse statistique des données spatiales en écologie, animée par Pr. Philippe Marchand (UQAT). | https://bios2.github.io/posts/2021-01-12-4-day-training-in-spatial-statistics-with-philippe-marchand/index.html |
|
Jan 12, 2021
Philippe Marchand
| https://bios2.github.io/posts/2021-01-12-4-day-training-in-spatial-statistics-with-philippe-marchand/index.html |
| https://bios2.github.io/posts/2020-12-07-making-websites-with-hugo/index.html |
|
| https://bios2.github.io/posts/2020-12-07-making-websites-with-hugo/index.html |
| https://bios2.github.io/posts/2020-12-07-making-websites-with-hugo/index.html |
| Making Websites with HUGO | https://bios2.github.io/posts/2020-12-07-making-websites-with-hugo/index.html |
| https://bios2.github.io/posts/2020-12-07-making-websites-with-hugo/index.html |
| This workshop provides a general introduction to HUGO, a popular open source framework for building websites without requiring a knowledge of HTML/CSS or web programming. | https://bios2.github.io/posts/2020-12-07-making-websites-with-hugo/index.html |
|
Dec 7, 2020
Dominique Gravel, Guillaume Larocque
| https://bios2.github.io/posts/2020-12-07-making-websites-with-hugo/index.html |
| https://bios2.github.io/posts/2020-09-21-data-visualization/index.html |
|
| https://bios2.github.io/posts/2020-09-21-data-visualization/index.html |
| https://bios2.github.io/posts/2020-09-21-data-visualization/index.html |
| Data Visualization | https://bios2.github.io/posts/2020-09-21-data-visualization/index.html |
| https://bios2.github.io/posts/2020-09-21-data-visualization/index.html |
| General principles of visualization and graphic design, and techniques of tailored visualization. This training was developed and delivered by Alex Arkilanian and Katherine Hébert on September 21st and 22nd, 2020. | https://bios2.github.io/posts/2020-09-21-data-visualization/index.html |
|
Sep 21, 2020
Alex Arkilanian, Katherine Hébert
| https://bios2.github.io/posts/2020-09-21-data-visualization/index.html |
| https://bios2.github.io/posts/2020-06-15-science-communication/index.html |
|
| https://bios2.github.io/posts/2020-06-15-science-communication/index.html |
| https://bios2.github.io/posts/2020-06-15-science-communication/index.html |
| Science Communication | https://bios2.github.io/posts/2020-06-15-science-communication/index.html |
| https://bios2.github.io/posts/2020-06-15-science-communication/index.html |
| Recordings, content and handouts from a 6-hour Science Communication workshop held over two days on 15 and 16 June 2020. | https://bios2.github.io/posts/2020-06-15-science-communication/index.html |
|
Jun 15, 2020
Gracielle Higino, Katherine Hébert
| https://bios2.github.io/posts/2020-06-15-science-communication/index.html |
| https://bios2.github.io/posts/2020-04-28-sensibilisation-aux-ralits-autochtones-et-recherche-collaborative/index.html |
|
| https://bios2.github.io/posts/2020-04-28-sensibilisation-aux-ralits-autochtones-et-recherche-collaborative/index.html |
| https://bios2.github.io/posts/2020-04-28-sensibilisation-aux-ralits-autochtones-et-recherche-collaborative/index.html |
| Sensibilisation aux réalités autochtones et recherche collaborative | https://bios2.github.io/posts/2020-04-28-sensibilisation-aux-ralits-autochtones-et-recherche-collaborative/index.html |
| https://bios2.github.io/posts/2020-04-28-sensibilisation-aux-ralits-autochtones-et-recherche-collaborative/index.html |
| Série de deux webinaires sur la sensibilisation aux réalités autochtones et la recherche en collaboration avec les Autochtones, offert du 28 au 30 avril 2020 par Catherine-Alexandra Gagnon, PhD. | https://bios2.github.io/posts/2020-04-28-sensibilisation-aux-ralits-autochtones-et-recherche-collaborative/index.html |
|
Apr 28, 2020
Catherine-Alexandra Gagnon
| https://bios2.github.io/posts/2020-04-28-sensibilisation-aux-ralits-autochtones-et-recherche-collaborative/index.html |
| https://bios2.github.io/posts/2020-01-14-mathematical-modeling-in-ecology-and-evolution/index.html |
|
| https://bios2.github.io/posts/2020-01-14-mathematical-modeling-in-ecology-and-evolution/index.html |
| https://bios2.github.io/posts/2020-01-14-mathematical-modeling-in-ecology-and-evolution/index.html |
| Mathematical Modeling in Ecology and Evolution | https://bios2.github.io/posts/2020-01-14-mathematical-modeling-in-ecology-and-evolution/index.html |
| https://bios2.github.io/posts/2020-01-14-mathematical-modeling-in-ecology-and-evolution/index.html |
| This workshop will introduce participants to the logic behind modeling in biology, focusing on developing equations, finding equilibria, analyzing stability, and running simulations.Techniques will be illustrated with the software tools, Mathematica and Maxima. This workshop was held in two parts: January 14 and January 16, 2020. | https://bios2.github.io/posts/2020-01-14-mathematical-modeling-in-ecology-and-evolution/index.html |
|
Jan 14, 2020
Sarah P. Otto
| https://bios2.github.io/posts/2020-01-14-mathematical-modeling-in-ecology-and-evolution/index.html |